Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02630 ATGGGCACCACGTACATGTGCGCTTTATTATTGTCTTTATTGCTTCATTCATTTATTATTATAGGGGCAGAGCAAAGGGTGGCCGGATCGGAAAAAGAAGCATTGGAAACTATCATAGCAAGTGGCCACGTGCACGGCGGTTACGTTTATGGCTCTCCCCCTCCACCTCCACCTCCACCTCCCCCTAAGTGTCACCCACCCCCACCACCTCCGAAACGGTTGGAGAGAGCTCGCAAAGCGCTTCTAAATTTCACTCGTTTTGTGGATGACCCAACTGGATATACGAGTAACTGGAAGGGTAGCGACACGTGTAAGTTCAAGGGGGTGCGATGTGCGAAATATCCAGGCTCAAATGAGCAAGCAGTTGCGGGATTAGACCTGAATGGAGCTAGGCTGTCTGGGAAAAACTGTAAAGAGCCGATCCCGCTCTCCGGCATCTTGGACAGGATACCAGAGCTCACATTCTTCCACGTCAACTCCAACAACTTCAGCGGTGGCATCCCACCTGAAATCACCAAGTACAAGTTTTTCTTCGAGTTAGACCTCAGTAACAACAAACTGGAGGGTGAGTTTCCAAAGGAAGTGCTGGAGTCCAAGCCCGAGTCCCAGCAACTGGTGTTCCTGGACCTCAGGTTCAACCGTCTCTGCGGCCCAATTCCACCCCAACTGTTTGAGTTGGATCTGGATGTGATTTTCATCAACAACAATCAATTCAGTGGCAATCTCCCCGATAACTTGGGGTCCACACGGGCCAGGTACCTCACTTTTGCCAACAACCAACTCACGGGTCCAATCCCGGCAAGCATTGGCAGAGCTTCCGAAACCCTCACCGAAGTGCTCTTCTTGGGCAACCACTTCGAGGGCTGCTTGCCCTACCAAATTGGGTACCTCAAAAAGGCCACCGTCTTTGATGTGAGCAAAAACTGGTTAACGGGTCCCATGCCACGCTCCTTTGGGTGCTTGGAAAGCATTCAGTATCTCAACTTGGAGCACAACCAGTTTTACGGAGAAGTTCCAGAGATGGTGTGTCAGCTCCCAGGGCTCCGCAACAATGGTAATCTATCCTTATCGGACAACTATTTCACTCAGGTTGGTCCTGCATGCAGGAACCTCATCAAAAACAATGTGCTAGACGTCAGCTACAATTGCATCCTGGGACTTCCAAATCAAAGGCCGCACGGACAATGCACAGAATTTTTCTCCAAGGTCAAACCCTGCCCAAATCCAAAGTATCTCCATTACGTCCCTTGTAAAGAATACTACCATCATCATCAGCAGCAGACCTACCCTCACCCCGCGCCTCCGGTCACTTACAACTCTCTCAACCCTCATCATCTTCATCGCTAG 1347 0.5026 MGTTYMCALLLSLLLHSFIIIGAEQRVAGSEKEALETIIASGHVHGGYVYGSPPPPPPPPPPKCHPPPPPPKRLERARKALLNFTRFVDDPTGYTSNWKGSDTCKFKGVRCAKYPGSNEQAVAGLDLNGARLSGKNCKEPIPLSGILDRIPELTFFHVNSNNFSGGIPPEITKYKFFFELDLSNNKLEGEFPKEVLESKPESQQLVFLDLRFNRLCGPIPPQLFELDLDVIFINNNQFSGNLPDNLGSTRARYLTFANNQLTGPIPASIGRASETLTEVLFLGNHFEGCLPYQIGYLKKATVFDVSKNWLTGPMPRSFGCLESIQYLNLEHNQFYGEVPEMVCQLPGLRNNGNLSLSDNYFTQVGPACRNLIKNNVLDVSYNCILGLPNQRPHGQCTEFFSKVKPCPNPKYLHYVPCKEYYHHHQQQTYPHPAPPVTYNSLNPHHLHR 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02630 448 MobiDBLite consensus disorder prediction 50 68 - -
Pumo8g02630 448 SUPERFAMILY Formin homology 2 domain (FH2 domain) 57 155 - -
Pumo8g02630 448 MobiDBLite consensus disorder prediction 49 72 - -
Pumo8g02630 448 SUPERFAMILY L domain-like 76 388 - -
Pumo8g02630 448 Pfam Leucine rich repeat N-terminal domain 77 111 IPR013210 -
Pumo8g02630 448 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 31 433 - -
Pumo8g02630 448 Gene3D Ribonuclease Inhibitor 74 249 IPR032675 -
Pumo8g02630 448 MobiDBLite consensus disorder prediction 428 448 - -
Pumo8g02630 448 Gene3D Ribonuclease Inhibitor 250 413 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02630 Pumo-Chr8 63460856 63462489 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02630 73 406 Trihelix Transcription Factor Family AT1G12040 40.653 5.23e-76 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02630 - - gmx:100781083 695.656