Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02598 ATGAATGTTGAGGGAGGGAGGATGAGGGGCGGTGAGGAGCGATCGACGGGGATTCGGAAGAAGGGAAGCGGAGTGAGACAATGGCTGGTCCTGGACGGCAGAGGAGAGACGCAGGTGGTGGAGGCCGGGAAGCACGCCATCATGAGACGGACGGGCCTCCCTGCGCGTGACCTGCGCATATTGGACCCTCTCTTGTCCTACCCTTCCACCCTTCTGGGCCGTGAGAGGGCCATCGTCATCAACTTGGAGCACATCAAGGCCATCATCACGGCCCACGAGGTCCTCCTCCTAAACTCTCGTGACCCCTCCGTCACCCCCTTCGTTCAGGAGCTCCAGGCAAGGATCCTCCGCCACCACCAGGCAGAAGCTGATGCTGAAGACCCCAATCCCAATCCAGACCCTGACGCCATCAAGATTCTCCCCTTCGAGTTCGTTGCCCTTGAGGCCTGTCTCGAGGCCGCTTGCAGCGTCTTGGAAAGCGAGGCAAAGACTTTGGAGCAGGAGGCTCATCCCGCCTTGGACAAGCTCACCTCCAAGATCAGTACTCTCAATTTGGAACGCGTTCGTCAGATTAAGAGCCGATTAGTCGCCATCACTGGTCGTGTTCAGAAGGTCAGGGATGAATTGGAGCACTTGCTCGATGACGATGAAGATATGGCTGAGATGTATCTCACTGAAAAGGAGTTGGAAACCTCTTCTGCCTCCGAAATCCATGATGAAGATGACGACAATCTTCTTCAACCTGATCATCACACTGACAGGACCGCTCCTGAAATATCCTTCGAAACTGGAGGAGGAGGACCCGACAACGTTCTTGGTAGGGACAGCCATGGAACCCGCGGTAGCGCCACCTACAGTGCCGTCACCAAGCAACTTGATGTCGAGGAGCTTGAGATGCTCTTGGAAGCTTACTTTGTGCAGATTGATGGCACCTTGAACAAGCTCTCTACGCTGAGGGAGTACGTTGATGACACAGAGGATTACATCAACATCATGCTGGATGACAAACAGAATCATCTCCTCCAAATGGGAGTCATGTTGACCACAGCAACTCTGGTAGTGAGTGCCTTTGTTGTTGTCGCCGGGATTTTTGGCATGAATATTCACATTGAGCTATTTGATGACCAGAAAGCTGGGATGACACAATTCCTCTGGACTGTTGGTGGTAGCACTGCAGGGACCATATTCCTGTATGTGGTTGCCATTGCCTGGTGTAAGCACAAACGCTTGCTAGAGTAA 1239 0.5343 MNVEGGRMRGGEERSTGIRKKGSGVRQWLVLDGRGETQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTLLGRERAIVINLEHIKAIITAHEVLLLNSRDPSVTPFVQELQARILRHHQAEADAEDPNPNPDPDAIKILPFEFVALEACLEAACSVLESEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKELETSSASEIHDEDDDNLLQPDHHTDRTAPEISFETGGGGPDNVLGRDSHGTRGSATYSAVTKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFDDQKAGMTQFLWTVGGSTAGTIFLYVVAIAWCKHKRLLE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02598 412 Gene3D Magnesium transport protein CorA, transmembrane region 101 340 - -
Pumo8g02598 412 Gene3D - 14 99 - -
Pumo8g02598 412 MobiDBLite consensus disorder prediction 1 20 - -
Pumo8g02598 412 CDD Mrs2_Mfm1p-like 28 410 IPR039204 -
Pumo8g02598 412 FunFam Magnesium transporter MRS2-1 16 99 - -
Pumo8g02598 412 MobiDBLite consensus disorder prediction 231 257 - -
Pumo8g02598 412 Coils Coil 148 168 - -
Pumo8g02598 412 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 13 411 IPR039204 -
Pumo8g02598 412 MobiDBLite consensus disorder prediction 229 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02598 Pumo-Chr8 63192384 63195783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02598 28 412 MRS2 Gene Family AT3G19640 65.148 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02598 - - gmx:100819578 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02598 8 63192384 63195783 Pumo8g02598 8 63192384 63195783 ECH