Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02582 ATGGTTATGCACGTATCCATGGCTTGGTCGAAGCTGGTGTTGGTGTTGATCTTTCTCAGCTTGGACACTTGTAAAGCACAGGAACAGAGCTCCACCCCGGTGTATCTGTACCATAACTGTTCAGGCGGCAACACCACCGCCAACAGTGCCTACCAACTAAACCTGAGGACCCTCTTCACTTCCCTATCTTCGAACGCCACCTCCGAATTCTCCAACAACACCGTGGGAACATCGTCGTCCGACAGGGTGTACGGACTGTTCATGTGCAGGGGCGACGTGCCCTCTAAGCCGTGCCAACAGTGCGTGGTGAACGCAACGGAGCGTCTCCGCTCACAGTGCTCTCTGGCCAAACAGGCCGTGATATGGTACGACGAGTGCACGGTACGGTACTCGAACCGGTCGTTTTTCTCGAGGGTGGACACGCGGCCACGTGTGGGCCTCCTGAACACCGCCAACATCTCCAACCAGGAATCGTTCATGAGGCTGCTTTTCCGAACCATAAACGAAACTGCTGATGAGGCTGCCAACTTTTCCATCGGTTTGAAGAAATATGCGGTCAAGCAAGCCAACATATCCGGGTTTCAGTCGCTCTACTGTTTGGCTCAGTGCACCCCGGATCTGTCCCCGGGAGACTGCAGAAGTTGTTTGAGTGGTGTGATAGGAGACCTTCCTTGGTGCTGTCAGGGAAAGCAGGGAGGAAGGGTTCTCTATCCTAGCTGTAATGTCAGGTACGAGCTCTACCCTTTCTATCGGACCACTGCCACTGCTTCCCCACCTGCGCCTTCACCCTCTCCGCCACTACTTCCTCCTCCAACTTCTGCAAATTCCGGAGGAAGCGGTGGGATCTCAGCTGGGACCATTGTTGCAATTGTGGTGCCAATCACGGTCGCTGTGCTTATATTTATAGTGGGAATTTGTTTCTTGAGTAGAAGAGCTAGGAAGAAGCACGATTCTGTAAAGGAAGGAAAAACTGCGTATGACATCACCACTGCGGAGTCCTTGCAAATTGATTTCGCCACAATTGAAGCTGCCACGAACAAATTCTCTGCGGATAATAAGTTGGGTGAAGGTGGATTTGGTGTGGTTTACAAGGGCACTCTTCCTAGCGGACAAGAAGTAGCTGTCAAGAGACTCTCCAAAAGCTCTGGACAAGGTGGAGAAGAATTTAAGAATGAAGTGGTGGTGGTTGCCAAGCTTCAACATAGAAATTTAGTCAGGCTTCTCGGGTTTTGCTTGCAAGGAGAAGAGAAGATACTTGTTTATGAATATGTGCCCAACAAAAGTCTCGACTATACTCTCTTTGATCCTGAAAAGCAAAGGGAGTTGGATTGGGGGAGACGTTACAAGATTATTGAAGGGATTGCTCGAGGCATTCAATATCTTCATGAAGATTCTAGGCTTAGAATTATACATCGTGATCTTAAAGCTAGCAACATATTGTTGGATGGAGATATGAATCCAAAAATCTCAGATTTTGGCATGGCAAGAATATTTGGAGTTGATCAAACTCAAGGAAACACCAGCAGAATAGTAGGAACTTATGGTTACATGGCTCCAGAGTATGCCATGCATGGAGAGTTCTCTGTTAAGTCTGACGTGTACAGTTTTGGAGTCCTCCTCATGGAGATTTTAAGTGGCAAGAAGAATAGCTCTTTCTATCAAACGGATGGTGCTGAGGATCTATTGAGCTATGCTTGGCAACTTTGGAAGGATGGAACACCCTTGGAACTGATGGACCCTATATTAAGAGAATCCTATAATCAGAATGAAGTTATCAGAAGCATCCAAATTGGTTTGCTCTGTGTCCAAGAAGATTCAGCTGACAGACCTACAATGGCAGAAATAGTTCTTATGCTAGACAGTAACACTGTTACTCTACGAACTCCTACGCGGCCTGCATTTTTCCTTCACAGTGGAACTGATCCAAACATGCCAAAGGAGCTGCAATTTGATCAATCTACAACAAAATCAATACCAATAATGTCTGTGAATGAGATGTCGATTAGCGAAATGGATCCTCGATAA 2025 0.4716 MVMHVSMAWSKLVLVLIFLSLDTCKAQEQSSTPVYLYHNCSGGNTTANSAYQLNLRTLFTSLSSNATSEFSNNTVGTSSSDRVYGLFMCRGDVPSKPCQQCVVNATERLRSQCSLAKQAVIWYDECTVRYSNRSFFSRVDTRPRVGLLNTANISNQESFMRLLFRTINETADEAANFSIGLKKYAVKQANISGFQSLYCLAQCTPDLSPGDCRSCLSGVIGDLPWCCQGKQGGRVLYPSCNVRYELYPFYRTTATASPPAPSPSPPLLPPPTSANSGGSGGISAGTIVAIVVPITVAVLIFIVGICFLSRRARKKHDSVKEGKTAYDITTAESLQIDFATIEAATNKFSADNKLGEGGFGVVYKGTLPSGQEVAVKRLSKSSGQGGEEFKNEVVVVAKLQHRNLVRLLGFCLQGEEKILVYEYVPNKSLDYTLFDPEKQRELDWGRRYKIIEGIARGIQYLHEDSRLRIIHRDLKASNILLDGDMNPKISDFGMARIFGVDQTQGNTSRIVGTYGYMAPEYAMHGEFSVKSDVYSFGVLLMEILSGKKNSSFYQTDGAEDLLSYAWQLWKDGTPLELMDPILRESYNQNEVIRSIQIGLLCVQEDSADRPTMAEIVLMLDSNTVTLRTPTRPAFFLHSGTDPNMPKELQFDQSTTKSIPIMSVNEMSISEMDPR 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02582 674 CDD STKc_IRAK 354 620 - -
Pumo8g02582 674 MobiDBLite consensus disorder prediction 257 276 - -
Pumo8g02582 674 SUPERFAMILY Protein kinase-like (PK-like) 335 642 IPR011009 -
Pumo8g02582 674 MobiDBLite consensus disorder prediction 258 272 - -
Pumo8g02582 674 FunFam cysteine-rich receptor-like protein kinase 10 424 626 - -
Pumo8g02582 674 ProSiteProfiles Gnk2-homologous domain profile. 33 135 IPR002902 -
Pumo8g02582 674 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 674 - -
Pumo8g02582 674 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 33 134 - -
Pumo8g02582 674 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Pumo8g02582 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Pumo8g02582 674 Gene3D Transferase(Phosphotransferase) domain 1 424 629 - -
Pumo8g02582 674 FunFam Cysteine-rich receptor-like protein kinase 25 143 249 - -
Pumo8g02582 674 FunFam Cysteine-rich receptor-like protein kinase 10 310 423 - -
Pumo8g02582 674 Pfam Protein tyrosine and serine/threonine kinase 350 618 IPR001245 GO:0004672|GO:0006468
Pumo8g02582 674 Gene3D - 32 135 IPR038408 -
Pumo8g02582 674 Gene3D - 144 249 IPR038408 -
Pumo8g02582 674 Pfam Salt stress response/antifungal 154 247 IPR002902 -
Pumo8g02582 674 Pfam Salt stress response/antifungal 40 132 IPR002902 -
Pumo8g02582 674 SMART serkin_6 348 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02582 674 ProSiteProfiles Protein kinase domain profile. 348 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02582 674 Gene3D Phosphorylase Kinase; domain 1 309 423 - -
Pumo8g02582 674 ProSiteProfiles Gnk2-homologous domain profile. 141 249 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02582 Pumo-Chr8 63042323 63045760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02582 12 674 Receptor kinase-like Gene Family AT4G05200 55.162 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo8g02582 PK_Tyr_Ser-Thr 7.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02582 - - gmx:100305391 1140.56