Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02568 ATGGTTGAAGGTGTCGATGGAGGTTTCAAAGATGCAGCATCGGAGGCGTTTCGCTATTGGGTGGGGGATTTGGAAAACAAGTATCACTTGAGTGGTTCAGCGGTGGGACCACACCCATGTCCAAGCATGGTTCGGGAGTTTCAGTCAGAGATAGGGAAAGAAACGAGGATGCAAGCATTGGAAAAATGGGGTGGGAAGCCAGATGTTCTTGTTGCTTTCGTAGGGACTGGGTCTAACGCTTTGGGTCTGTTCCATGAGTTCATAGGGGATACGCATGTAAGGCTGATTGGAGTTGAGGCTGGTGGTTTGTGGTTGGAAAGTCGAAGCCATTCTTCAACGTTGGCCACGGGAGAAGTCGATGATTACCCCATAGAGCCATCAGTTATTTACTGCAGGACAAATTATTCAACCACATTCCATCGCAGCCGGAATGGAGTATATCCAGGAGTTGGTACAGAGTTAAGCTTTCTTAAAGAAAGCGGGCGTGCGGAGTTCTGCGTTGCAACTGATCAAGAAGCCCTTGATGGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGACTGGGAAAATCGTGGTTGAATTGAATGGGAGGCTAAATAAGTGTGGGGTTATAAGCCCTCGCTTTGATGTTGGTGTCAAAGAGATTGAAGGTTGGACACTTGGACTGCAAGACTCCTCCCCTCAAGACAGGTATCCTTAA 705 0.4794 MVEGVDGGFKDAASEAFRYWVGDLENKYHLSGSAVGPHPCPSMVREFQSEIGKETRMQALEKWGGKPDVLVAFVGTGSNALGLFHEFIGDTHVRLIGVEAGGLWLESRSHSSTLATGEVDDYPIEPSVIYCRTNYSTTFHRSRNGVYPGVGTELSFLKESGRAEFCVATDQEALDGYIGEFEYVDDHRTGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTLGLQDSSPQDRYP 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02568 234 Gene3D - 1 45 IPR036052 -
Pumo8g02568 234 PANTHER TRYPTOPHAN SYNTHASE-RELATED 7 177 IPR023026 GO:0000162|GO:0004834
Pumo8g02568 234 Gene3D - 46 175 IPR036052 -
Pumo8g02568 234 Gene3D - 201 229 - -
Pumo8g02568 234 Gene3D - 176 200 - -
Pumo8g02568 234 Pfam Pyridoxal-phosphate dependent enzyme 4 189 IPR001926 -
Pumo8g02568 234 SUPERFAMILY Ribosomal protein S8 175 220 IPR035987 GO:0003735|GO:0005840|GO:0006412
Pumo8g02568 234 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 7 178 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02568 Pumo-Chr8 62844263 62848955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02568 176 227 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 90.385 2.73e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02568 K01696 - gmx:100170686 257.299