Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02565 ATGGGTACGATGCTACAAACCATTTTGACTGTGCTTCTTCTCCTTATGCTTCTTCTCATCATCATCTTCCTCTTCCTTCTCTTCAAACCATGGCGCTTCTTTTTCTCTTCGCGTTTCCGCTCCTCCATCAAGGGCGAGCTAGAGCGGCCCCTTGTTGCGGACGAAGGTGATGCGAATGCGTCGTCGTTTATTCAGAACAATGAATTGCCTCGAGATTATGATCTCGAGGGTGCGTGTTATCCCAGTGAAGTTCATTTTCGCTCACCTCGAACCCATGGCCAAGGCCTTGTTCATAAGCAAAGGCTTCAAACCCTTTCTGCTTCACTTAACATGCCCCTGGGTGGTGATACTTTGGTCGTGGATGTGATCTCTGATCATTCCTCTGAGGATGTTGATGTTGGTCAAACGCTTAAGCTTCCCTCAGCTCATTTAGCTCAAATTCAAAAGCATGCCCCGCCCAATTTTCAAAATGATAGACTGCAGGATTTTGTGCAAATGGATATCTCTGATCAAAGAAGTTGCCTCACTCTGGAGGTTATCACTGGCCCTTCTCGGGGACTTCGTTATTCTGTACAGTCCACGAATCCCTCTTGTCTTCCGCTAACCTTGGGAAGAGTTTCTCCGAGTGATTTGTTGATAAAGGATTCGGAAGTGTCAGGAAAGCATGCGATGATAAAGTGGAATTTGGATAAAATGAAATGGGAGTTGGTGGATATGGGTAGCCTGAATGGAACACTGTTGAATTCTAAGCCAATCAACCATCCAGACACTGGAAGTAGGAATTGGGGGGATCCAATGAATCTTACTAATGGAGATATCATAACACTTGGAACAACATCAAAAGTAATGGTTCATATTACATCGCAAACTCAGCATCACATTCCCTTTGGAGTTGGTATGGCATCAGATCCCATGGCTTTGCGTCGAGGAGGAAAAAAGTTTCCTATGGAAGACGTTTGCTACTGTCAGTGGCCTCTACCTGGGCTGGATCAGTTTGGACTTTTTGGCATTTGTGATGGGCATGGTGGAGATGGGGCTGCCAAATCTGCTAGCAAACTTTTTCCTGAGATAATTGCTAGTATATTATCGGATACATTAAAAAGGGAGAGGGTTTTATCACTCTGTGATGCTTCAGATATTCTTCGAGATGCATTTTCTCAAACAGAAGCACACATGAATCACTATTATGAGGGATGTACAGCAACAGTGTTTCTGGTGTGGACTGATGGTGATGAAAATTTCTTTGCACAATGTGCTAATGTTGGAGACTCCACCTGTATTATGAGTGTGAATGGGAAACAAATCAAGATGACAGAAGATCACAAAATAACGAATTATTCTGAAAGACTCAGAATCGAAGAGACAGGTGAACCATTAAAAGATGGGGAAACACGTCTATATGGTTTAAATCTGGCAAGAATGCTTGGGGACAAATTCCTGAAACAGCAGGATTCCCGGTTCAGTTCAGAACCTTACATAAGTCAAGTTGTGCATATTGATCAAGCAAGCAAGGCTTTTGCTATTCTGGCTAGTGATGGGTTATGGGATGTCATCAGCGTGAAGAAGGCAATTCAGCTTGTGTTGCAGATGAGGGAGAGATGCTATTCAGAGAGAGAGAATACAGCAGAAAAGACTGCTAGTTTGTTGTTGAATGAGGCTAAAACACTCAGAACAAAGGATAATACCTCTGTAATTTTCTTAGATTTTGATACCTTCAACAGATTCTCTTGTAAAGTTGAATCCTAG 1746 0.429 MGTMLQTILTVLLLLMLLLIIIFLFLLFKPWRFFFSSRFRSSIKGELERPLVADEGDANASSFIQNNELPRDYDLEGACYPSEVHFRSPRTHGQGLVHKQRLQTLSASLNMPLGGDTLVVDVISDHSSEDVDVGQTLKLPSAHLAQIQKHAPPNFQNDRLQDFVQMDISDQRSCLTLEVITGPSRGLRYSVQSTNPSCLPLTLGRVSPSDLLIKDSEVSGKHAMIKWNLDKMKWELVDMGSLNGTLLNSKPINHPDTGSRNWGDPMNLTNGDIITLGTTSKVMVHITSQTQHHIPFGVGMASDPMALRRGGKKFPMEDVCYCQWPLPGLDQFGLFGICDGHGGDGAAKSASKLFPEIIASILSDTLKRERVLSLCDASDILRDAFSQTEAHMNHYYEGCTATVFLVWTDGDENFFAQCANVGDSTCIMSVNGKQIKMTEDHKITNYSERLRIEETGEPLKDGETRLYGLNLARMLGDKFLKQQDSRFSSEPYISQVVHIDQASKAFAILASDGLWDVISVKKAIQLVLQMRERCYSERENTAEKTASLLLNEAKTLRTKDNTSVIFLDFDTFNRFSCKVES 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02565 581 SMART PP2C_4 291 567 IPR001932 -
Pumo8g02565 581 ProSiteProfiles PPM-type phosphatase domain profile. 297 569 IPR001932 -
Pumo8g02565 581 CDD FHA_PP2C70-like 175 285 - -
Pumo8g02565 581 SUPERFAMILY SMAD/FHA domain 174 284 IPR008984 GO:0005515
Pumo8g02565 581 SUPERFAMILY PP2C-like 310 570 IPR036457 -
Pumo8g02565 581 ProSitePatterns PPM-type phosphatase domain signature. 334 342 IPR000222 GO:0043169
Pumo8g02565 581 ProSiteProfiles Forkhead-associated (FHA) domain profile. 201 252 IPR000253 GO:0005515
Pumo8g02565 581 Pfam FHA domain 202 277 IPR000253 GO:0005515
Pumo8g02565 581 Gene3D - 169 304 - -
Pumo8g02565 581 SMART FHA_2 200 252 IPR000253 GO:0005515
Pumo8g02565 581 FunFam Protein phosphatase 2C 70 170 304 - -
Pumo8g02565 581 PANTHER PROTEIN PHOSPHATASE 2C 308 566 IPR015655 GO:0004722|GO:0006470
Pumo8g02565 581 CDD PP2Cc 309 569 IPR001932 -
Pumo8g02565 581 Pfam Protein phosphatase 2C 308 562 IPR001932 -
Pumo8g02565 581 FunFam Protein phosphatase 2C 70 305 576 - -
Pumo8g02565 581 Gene3D - 305 579 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02565 Pumo-Chr8 62803768 62809406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02565 29 571 PP2C-type Phosphatase Gene Family AT5G19280 56.743 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02565 K01090 - gmx:100170642 1026.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02565 8 62803768 62809406 Pumo8g02565 8 62803768 62809406 ECH