Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02549 ATGAAATGGATGGTGGAACCTGCATATACTGTGACATCTGACAGTGAAACCACTGGAGAAGAAAAATCATCTACTTTTCCTGAAATAGCAATTGGCATTGATATTGGCACATCACAATGTAGTGTTGCTGTGTGGAATGGTTCCCAAGTGGAGCTTTTGAAGAACACAAGGAATCAGAAGATTATGAAATCATATGTAACCTTCAAAGATAACATCCCTTCTGGTGGAGTTAGCAGTCAACTCTCCCATGAGGACGAGATGTTGTCTGGAGCAACGATTTTCAACATGAAACGCTTGATTGGCAGAGTTGATACTGACCCAGTTGTCCATGCATGTAAGAGTCTTCCATTTCTCGTGCAGACTTTGGACATTGGTGTTCGCCCATTTATTGCTGCATTAGTGAACAATATGTGGAGATCCACCACTCCAGAAGAAGTCCTGGCAATATTTCTGGTGGAATTAAGAGCAATGGCTGAAGCTCAGCTGAGACGAAGAATAAGAAATGTGGTTCTTACAGTTCCAGTTTCATTCAGTCGATTTCAGCTAACCCGGATAGAGCGTGCTTGTGCCATGGCTGGCCTTCATGTTCTCAGGTTGATGCCTGAACCAACAGCTGTGGCTTTGTTATATGGACAGCAACAACAGCTGACTTCTCATGAGAATATGGGCAGTGGAACTGAGAAAATTGCTCTCATTTTCAATATGGGTGCTGGTTATTGTGATGTTGCTGTCACTGCTACAGCGGGAGGAGTATCACAGATTAAAGCCTTGGCAGGAAGTACCATTGGTGGTGAAGACTTGCTTCAGAATATGATGCGTCATCTGTTACCAGATTCTGAAAATCTATTTAAGAACCATGGGGTCAAAGAAATTAAACGGATGGGCCTGCTTCGTGTTGCAATCCAGGATGCAATTCACCAGCTTTCCTCTCAGACCAGCGTACAAGTTGATGTAGACTTGGGAGATGGTTTGAAGATATGCAAGGCTGTTAACCGGGAGGAGTTTGAGGAGGTAAACAGAAAGGTGTTTGAGAAATGTGAAAGCCTTATCATACAGTGTTTGCAAGATGCCAAGGTAGAAGTTGAAGATGTAAACGATGTGATAATCGTAGGTGGATGCTCTTATATCCCAAGGGTGAAGAATCTTGTTACTAACATATGTAAAGGGAAGGAACTTTATAAAGGCATGAATCCTTTAGAAGCTGCTGTTTGCGGTGCAGCAGTGGAAGGAGCTGTTGCTTCAGGCGTCAATGATCCCTTTGGGAACTTGGACTTGTTAACTATCCAAGCTACACCTCTTGCCATTGGGATTCGAGCTGATGGGAACAACTTTGTCCCTGTAATTCCGAGGGATACCACAATGCCAGCACGGAAGGAGCTAGTTTTCACAACTATTCATGATAATCAAACCGAGGCATTGATCCTTGTCTATGAAGGAGAGGGTGAAAAGGCAGAAGAAAACCACCTATTGGGATATTTCAAGATAATGGGAATACCTGCTGCGCCTAAAGGAGTCCCAGAAATCAATGTGTGCATGGACATAGACGCTGCAAACGTGCTAAGAGTTTTAGCTGGTGTTGTGATGCCTGGTTCTCGCCAACCTGCGATTCCTGTTATGGAGGTAAGGATGCCAACGGTGGATGATGGGCATGGTTGGTGCGCCGAGGCACTAAATAGAACCTATGGTGCCACACTGGATTTAGTTACTCTCCAGAAGAAGGCATAA 1725 0.4417 MKWMVEPAYTVTSDSETTGEEKSSTFPEIAIGIDIGTSQCSVAVWNGSQVELLKNTRNQKIMKSYVTFKDNIPSGGVSSQLSHEDEMLSGATIFNMKRLIGRVDTDPVVHACKSLPFLVQTLDIGVRPFIAALVNNMWRSTTPEEVLAIFLVELRAMAEAQLRRRIRNVVLTVPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYGQQQQLTSHENMGSGTEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTIGGEDLLQNMMRHLLPDSENLFKNHGVKEIKRMGLLRVAIQDAIHQLSSQTSVQVDVDLGDGLKICKAVNREEFEEVNRKVFEKCESLIIQCLQDAKVEVEDVNDVIIVGGCSYIPRVKNLVTNICKGKELYKGMNPLEAAVCGAAVEGAVASGVNDPFGNLDLLTIQATPLAIGIRADGNNFVPVIPRDTTMPARKELVFTTIHDNQTEALILVYEGEGEKAEENHLLGYFKIMGIPAAPKGVPEINVCMDIDAANVLRVLAGVVMPGSRQPAIPVMEVRMPTVDDGHGWCAEALNRTYGATLDLVTLQKKA 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02549 574 Gene3D - 31 411 - -
Pumo8g02549 574 FunFam Heat shock 70 kDa protein 8 264 345 - -
Pumo8g02549 574 PANTHER HEAT SHOCK PROTEIN 70KDA 30 524 IPR013126 GO:0005524|GO:0140662
Pumo8g02549 574 CDD HSP70_NBD 31 411 - -
Pumo8g02549 574 Gene3D - 215 393 - -
Pumo8g02549 574 FunFam Heat shock 70 kDa protein 8 419 534 - -
Pumo8g02549 574 Pfam Hsp70 protein 30 525 IPR013126 GO:0005524|GO:0140662
Pumo8g02549 574 FunFam Heat shock 70 kDa protein 8 94 149 - -
Pumo8g02549 574 PRINTS 70kDa heat shock protein signature 424 443 - -
Pumo8g02549 574 PRINTS 70kDa heat shock protein signature 169 189 - -
Pumo8g02549 574 PRINTS 70kDa heat shock protein signature 364 380 - -
Pumo8g02549 574 PRINTS 70kDa heat shock protein signature 396 416 - -
Pumo8g02549 574 PRINTS 70kDa heat shock protein signature 29 42 - -
Pumo8g02549 574 PRINTS 70kDa heat shock protein signature 505 521 - -
Pumo8g02549 574 PRINTS 70kDa heat shock protein signature 57 69 - -
Pumo8g02549 574 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 421 536 IPR029047 -
Pumo8g02549 574 SUPERFAMILY Actin-like ATPase domain 227 412 IPR043129 -
Pumo8g02549 574 Gene3D Actin; Chain A, domain 4 264 345 - -
Pumo8g02549 574 Gene3D - 94 149 - -
Pumo8g02549 574 MobiDBLite consensus disorder prediction 1 23 - -
Pumo8g02549 574 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 426 532 IPR029047 -
Pumo8g02549 574 SUPERFAMILY Actin-like ATPase domain 29 213 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02549 Pumo-Chr8 62633603 62636580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02549 30 524 Calmodulin-binding Proteins AT3G12580 39.130 3.44e-105 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02549 K09489 - gmx:100809773 1079.32