Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02539 ATGGATTTTGTAAGTTGTGCAGTGCTAATGCTGTTGGCGTGCACCACCATTCATGTTGTGCGTTCATTCCTAAGCAGAAAACGAAACTACAAACTTCCACCCGGACCCTCTCCTCTTCCCATCATAGGAAACCTTCTTGAACTTGGCAACAAGCCCCACCAGTCATTGGCCAAGCTTGCTAAGATACATGGCCCTCTAATGAGCCTAAAGCTGGGCCAAATAACCACCGTAGTGGTTTCTTCAGCTGAGATGGCCAAAGAGGTGCTCTTAACCCATGACAACTCGTTGTCAAACCGAACCATTCCCCAATCTGTGTCAGTTCTGAACCACGAGAACTATAGCCTTGCCTTCATTCCCGTTTCCCCTCTTTGGCGAGACTTGAGGAAAATATGCAATGGCCAGTTGTTTGCACGCAACACTCTTGATGCCAGCCAAGACGTTAGGCGTAACAAAGTGCAACAACTCCTCTCTGAAATCCACCAAAGCTGCCAAATCGGCGAAGCAGTTGATATTGGAACAGCAGTATTCAAGACTACCATCAACTTATTATCAAACACCATTTTCTCTGTGGATTTGGTTCAATCTGCTGGCACAGCCGGAGAGTTCAAGGACTTGGTCACCAATATCACTAAACTGGTTGGAACACCAAACCTGGCGGATTATTTTCCTATCTTGAAGATGGTTGATCCACAAGGCTTCAAAAGACGTCAGGCTAAGAATGTTGAGAAGGTGTTGGACATTTTCGACGGCTTGGTTGACCAACGCTTGAAACAAAGGCAAGGCACACATGTTGACGTAGTTCACAGCGACATGTTAGACGCTCTTCTCAACATTTCTCAGGAGAACGAGATGATGGACAAAACAATGATTCAACATTTGTTACATGATTTATTTGTTGCGGGAACGGATACGACGACTTCTACACTAGAATGGGCATTGACTGAGTTAGTACGTAATCCAGAGGTTATGTCAAAAGCAATAAAAGAACTTGAGTTAAACATTGGTAGAGGTAACCCTGTGGAGGAATCAGACATTGCAAGACTCCCTTACTTGCAAGCTATAATAAGAGAGACATTCCGCTTGCATCCACCAGTTCCATTTTTACTACCTCGAAAAGCTGGGACAGATGTAAACGTATGTGGCTACACCATCCCAAAGGATGCACAAGTGCTAGTTAATGTGTGGACTATTGGCAGGGATTCGAGCATTTGGGAGAATCCAAATTGGTTTTATCCAGAGAGGTTTCTAGTGTCAGACATTGATGTTAAGGGGCAGAATTTTGAACTCACACCCTTTGGTGGTGGGCGGAGAATATGCCCTGGCATGCTTTTGGCTATGAGGATGCTACTCTTGATGTTGGGTTCGCTGATAAACTCCTTTGATTGGAAACTTGAAGATGGCATGGAACTAGATGATACGGACATGGATGAGAAATTTGGGATCACCTTACAAAAGGCTCAGCCCTTGCGAGTTGTTCCTGTCAAAATAAACAACTAA 1497 0.4456 MDFVSCAVLMLLACTTIHVVRSFLSRKRNYKLPPGPSPLPIIGNLLELGNKPHQSLAKLAKIHGPLMSLKLGQITTVVVSSAEMAKEVLLTHDNSLSNRTIPQSVSVLNHENYSLAFIPVSPLWRDLRKICNGQLFARNTLDASQDVRRNKVQQLLSEIHQSCQIGEAVDIGTAVFKTTINLLSNTIFSVDLVQSAGTAGEFKDLVTNITKLVGTPNLADYFPILKMVDPQGFKRRQAKNVEKVLDIFDGLVDQRLKQRQGTHVDVVHSDMLDALLNISQENEMMDKTMIQHLLHDLFVAGTDTTTSTLEWALTELVRNPEVMSKAIKELELNIGRGNPVEESDIARLPYLQAIIRETFRLHPPVPFLLPRKAGTDVNVCGYTIPKDAQVLVNVWTIGRDSSIWENPNWFYPERFLVSDIDVKGQNFELTPFGGGRRICPGMLLAMRMLLLMLGSLINSFDWKLEDGMELDDTDMDEKFGITLQKAQPLRVVPVKINN 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02539 498 Gene3D Cytochrome P450 23 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02539 498 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02539 498 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02539 498 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02539 498 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02539 498 Pfam Cytochrome P450 33 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02539 498 CDD CYP76-like 60 493 - -
Pumo8g02539 498 FunFam Cytochrome P450 76C4 24 492 - -
Pumo8g02539 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Pumo8g02539 498 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02539 498 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02539 498 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02539 498 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02539 498 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02539 498 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02539 498 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02539 498 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02539 498 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 495 - -
Pumo8g02539 498 SUPERFAMILY Cytochrome P450 33 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02539 Pumo-Chr8 62539492 62541429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02539 1 495 Cytochrome P450 AT2G45550 47.628 2.62e-165 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02539 - K23810 gmx:100798291 742.651