Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02501 ATGAGACTTGAATCGGGAACTTGCAATGTGTGCTCGGCTCCTTGTTCATCTTGCATGCATCTTAACCATGCTCTCATGGGGTCAAAGGCTGAAGAGTTTTCTGATGAAAACTGTCGCATAGGAGAGGCTAATTCTATGGACGAGGATAATGCATATTCTCTTAGGAGCAGAGCTTGTGAAAGCTCACAGCACACTGTCAGTGAAGCAAGTAATATGCAGAGTGTTAATTCAAGTCATGATGCTCTGTCTGAAAATGCCGAGAGTACCGAGAGTAGACAGATACCAAATAAGTATCAGGATTCCAAGCATTTAGAAGGTCATGATGACAACACTTCTTGTATTAGTAGAGCCAGTGATGCTAATTTAGTGAATGGTAGCCATCAAAGGAATGAAGAGAGAATAATAATGCATGTGGAAAGGGATTCATGTTCTCATGTCCCAGAAAAGTTGTCAGATTGCTCCATTGAGAATTATAGTTCATCATTGACCAAAGAGAGGGAACCTGTTGTTTCTGGCGAGAAATATATTGCTGTTAAGGATGGCCTTATTGAGAGTACTTCCAAGGTTTCACTAAAAGTATGTCCCAAGACAGAAGCAGATACTGATGTCTGTGATCCTAACAATGAAGATCCTAAATGTTCAGTTCAAGATGGACAGTGTGAGAAAGCTGAAGAGCTGGTTAAATCGCCTGGCAAGCAGGAACCTCAATCTGAAGACGAGAGTGATGAATCAGATGTTGTGGAACATGATGTAAAGGTGTGTGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTAGTAGGTGCAGTGATGGTGCAGAGCACACCTACTGCATGCGAGAAATGCTTGAGAAAGTCCCTGAAGGGGATTGGTTATGTGAAGAATGCAAAGATGCAGAGGAGAATGAAAGTAAAAGACTGGATGTTGAAGACAAAAAAATGGTTGAAGTTACTTCAACCTCACAAGTTTCTGGCAAAAGACTCTCTGATAACATTGAAGTAGCTCCAGCAGCAAAAAGACAAGCTCTTGAATCAAGTACAGGATCACCAAAGACATCAAGTCCCAAGAGATTAGTTCCACTGTCCCGAGAATCTTCATTTAAGAGCTTAGATAAATCAAAAGTGAAGCCTGGTCTTGTGATTCCTATTCGAAACCACTCTGGTGGTAATGACACAGAGATTGCTCGCTCTCCTTCCATTGGTTCCCGGGGTCAAAATCCAAAAGGTATACTGTTGAAGTCTAATTCATTCAACAACGTAAATTCCAAGCCAAGAGTCAAACTTGTTGATGAAGTTGTTCCCCAAAAACCAAAAGGGGGTAATGAACATACTTCAAAGAACATGGAGATGCCTTCTCGGATGACTGGCAAATCAACATTATTCAAATCCTCAAGTTTGGGGCGTTCGAATCCAACTGAATCAAAAGTTAAAATGCTTTCGCCCAAGTCTGCAACTACTCAGGATTTGAAAGGGTCTAGACATTTAAAAGAATCAGGTGCATTTGACAGGAAATTTCCGTCTAGGAATGATCGGCCTGTGGCTAGTTCTGTTGTTTCAACTCCTAAGGGTGATCAAAAGCTTACACCTCGTGCTGAAACCAGTAAACCTTCAGCAATGAACAACAATCGAGAGTTGAAGGTTAACCAGGATGGAAAATCAAGCGCATTATCAAGGTCAATGAGTAATATAAGCCGTAAAAGTTTGGAGCCTCAAGTTAGTTCAGAGAGAACATCAACCCGTGTTGATGAAGCTCAACAGGATGTGCTGCCTCGATCACGGGAGACAGCAAGTCAGGTTGAGAAAAGCAAAGATAGTTCCAGTGATCGTGGAAGGCCAGCTGTTCCTACTTCAAAAAACCCATTCTGTCAAAAATGTAAGGAATTCGGCCATGCTTTGGAATGTTGTACAGCTGGTACTACACAGGAATCTGGTGCTGAAATATCTGTCACTGCCTCGAGTAGTTCAAAAGAGGAGATGCATAAAGACAATATATTGAAAGCTGCAATCCAGGCTGCTTTACTTAGAAGGCCTGAAATTTACAAGAAGAAAGAAGTATCTAATCAAACTGACGAGGTTTCTACCTCAGGCACAGAGTTGAATTCCGAAGTGACTTCGAAAGACCAAGTTTTGGTTTCCAGCACACTGAAGAATAGCATATCTGCAGATGAAACCCAAGAACAATGGGAAATCCTTGAGAATTCTACCTCAGATTCTTCCAAATGTTCATCTGCCAATGATTTGAAGCAACTTAACTCTTGTCCAGCTGACTTTCGGTCCCAATCAGGAAAGTCAGATTCCATTGGTCTTGCAGCTGGAAAGCCTGTAGTGAGAGACTTGTCTAATAAAGCTGTGACAATGTCAAGTGTTCCTTCGAAGATGTTGGCCTTTCCTGAATATGAATACACCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGAAAGCCTCCTGATTTATATACTGGACTTCAGGCACATTTATCCTCTTGTGCTTCTCCTAAGGTTGTTGAGGTAGTGAACCAGTTTCTACCCAAAGTTTCCCTCAATGAAGTTTCTCGCCTGAGCATGTGGCCTTCACAATTTCATCATGGTGGTGTTAGTGAAGATAATATTGCTCTTTACTTCTTTGCCAGGGATGTTGAAAGTTATGAGAGACACTACAAGGGTCTATTGGATCACATGATTAGAAATGATTTAACTCTTAAAGGAAACTTTGATGGTGTCGAACTGCTGATATTCCCTTCCAACCAGCTTCCTGAAAATTCACAGCGCTGGAATATGTTGTTTTTCTTATGGGGCGTATTTAGGGGGAGGAGGATCAATCATTCAGATTCTGCAAAAAAGATTTGTATTCCCAGTTTGAATGTAATGCCAGTTGAGGAGAAATCCTCAACTGCTGTTTGGACTATGCCTGAAACACATTGTTCGCCCAAGTGCAAGGATGAAGAATCAATTGATTGTGATAAAGCATGCAATGCACTTCTCCCATCCACTTCCATAAACCAGCATCAGACTACTGGAAGTAGGAATATCGATGTCAATGACCAGACACATTTTGGTTCACAAGTAAACTTAGAGAAGCTAGATAGTAGGATCGACTCAAAATCTACATCAAGGGTTCCAACAAGCAGTACTCTGTTATGTCAAGAAATGAACTCCACTAGTTCATCCCTGAAAGCTAGTGTACTTGAACAAGAACAGTGCAGAGAGTCTAAACCTCCTGAAGCAATGGGAAATAGTGCTAGTAGTAGGATTGTGGAAGCAAAAACTGATTCTGATATTTCTGTCAAGCAAGAGAACACCTTGTCTTTGATTCCTTCTGAAAAAGGTGCTGCAAGCAATAATGGTAACGATAAAATTTTGGAGAAAATGAACAGTGATGAAGACCAGCAGAGGCCTACGAAGAAACAAAAAGAGGATTGTCCCTATATTGATTTGGAGGCAAATATTGAAATTGAAAATCAAGAAACAGTTGCTGCAAGCAATTTTAGTAAGGATAAAAATTCAGTAACAGTTATTGTTGATGAAGATCAGCAAAGGCCCGAGAGGAAACAGAAAGATGATCATTATATTGACTTGGAGGTAACACTTGAAGATCAAGAAACAGGTGCTGTAAGCAATATATGTGAGGATAAAATTTCAGAAAAAATGGATGTTGAGGAAGATTGGCGATGGCTTAAGAGGAAACAGAAAGATGATCACTATATTGACTTGGAGGCAACTTTTGAGGGAGACCCAAGTGTAGAAGGGATCAACTGTCAGCTACCTAATGATAAAGTTCAGCATGTAGATCTTTCTGACACAATTATGCAGGGTTCTGCTGTCAGTTGTCAGAAAATGCCTTGGGGTGAGGGAAACGCCAAGTTAGAAGACAGAGAAAGTTCTGGCAAGAAGCTAAAGACAGGTTTTGGTGGGATTTATGGGTCCGGAGGTAGAGACTCTTTTAATGACAGTTTTACATCTCTTGGAAATGATCTTGGCTCCTGTTCTTCAGTTGAGGACAAAGGATGTGAGGAAGCTTGTGATGAGAAAATCATCCGTGAGGACTTGGGAACGATGGAAAGAACCTTCTTTCCAGTTGGCACACAGAATATTAGCAACTCACTATCAGTAATGAATAGCATGTCATCCAAAGGGTTTGGTGAGTACGATGAAGGGATTCCCAATCTAGAGCTTGCCTTAGGGGGCAAAACGAAACCACCACCGGCTGCGCCAAAGGGTATGTTGCCTTTCTTAGTTGGGGCAGTAGACAGGCAAAATAACCGGCCAGATAACTTGGGAGATGGGCAGGAGGATGATGGTGTTGCTGCATCTCTTTCCCTCTCTCTGTCCTTTCCATCTCCAAACAAGGAACACACAAAAGCTGCGGAGATTTTGCCTGATGGGCAGCGTGTGAACAACTCGTTTTTCCTTTTTGGGAGAAAATAA 4434 0.4163 MRLESGTCNVCSAPCSSCMHLNHALMGSKAEEFSDENCRIGEANSMDEDNAYSLRSRACESSQHTVSEASNMQSVNSSHDALSENAESTESRQIPNKYQDSKHLEGHDDNTSCISRASDANLVNGSHQRNEERIIMHVERDSCSHVPEKLSDCSIENYSSSLTKEREPVVSGEKYIAVKDGLIESTSKVSLKVCPKTEADTDVCDPNNEDPKCSVQDGQCEKAEELVKSPGKQEPQSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKDAEENESKRLDVEDKKMVEVTSTSQVSGKRLSDNIEVAPAAKRQALESSTGSPKTSSPKRLVPLSRESSFKSLDKSKVKPGLVIPIRNHSGGNDTEIARSPSIGSRGQNPKGILLKSNSFNNVNSKPRVKLVDEVVPQKPKGGNEHTSKNMEMPSRMTGKSTLFKSSSLGRSNPTESKVKMLSPKSATTQDLKGSRHLKESGAFDRKFPSRNDRPVASSVVSTPKGDQKLTPRAETSKPSAMNNNRELKVNQDGKSSALSRSMSNISRKSLEPQVSSERTSTRVDEAQQDVLPRSRETASQVEKSKDSSSDRGRPAVPTSKNPFCQKCKEFGHALECCTAGTTQESGAEISVTASSSSKEEMHKDNILKAAIQAALLRRPEIYKKKEVSNQTDEVSTSGTELNSEVTSKDQVLVSSTLKNSISADETQEQWEILENSTSDSSKCSSANDLKQLNSCPADFRSQSGKSDSIGLAAGKPVVRDLSNKAVTMSSVPSKMLAFPEYEYTWQGVFEVHRNGKPPDLYTGLQAHLSSCASPKVVEVVNQFLPKVSLNEVSRLSMWPSQFHHGGVSEDNIALYFFARDVESYERHYKGLLDHMIRNDLTLKGNFDGVELLIFPSNQLPENSQRWNMLFFLWGVFRGRRINHSDSAKKICIPSLNVMPVEEKSSTAVWTMPETHCSPKCKDEESIDCDKACNALLPSTSINQHQTTGSRNIDVNDQTHFGSQVNLEKLDSRIDSKSTSRVPTSSTLLCQEMNSTSSSLKASVLEQEQCRESKPPEAMGNSASSRIVEAKTDSDISVKQENTLSLIPSEKGAASNNGNDKILEKMNSDEDQQRPTKKQKEDCPYIDLEANIEIENQETVAASNFSKDKNSVTVIVDEDQQRPERKQKDDHYIDLEVTLEDQETGAVSNICEDKISEKMDVEEDWRWLKRKQKDDHYIDLEATFEGDPSVEGINCQLPNDKVQHVDLSDTIMQGSAVSCQKMPWGEGNAKLEDRESSGKKLKTGFGGIYGSGGRDSFNDSFTSLGNDLGSCSSVEDKGCEEACDEKIIREDLGTMERTFFPVGTQNISNSLSVMNSMSSKGFGEYDEGIPNLELALGGKTKPPPAAPKGMLPFLVGAVDRQNNRPDNLGDGQEDDGVAASLSLSLSFPSPNKEHTKAAEILPDGQRVNNSFFLFGRK 1477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02501 1477 MobiDBLite consensus disorder prediction 393 408 - -
Pumo8g02501 1477 MobiDBLite consensus disorder prediction 63 95 - -
Pumo8g02501 1477 MobiDBLite consensus disorder prediction 692 710 - -
Pumo8g02501 1477 SMART PHD_3 253 300 IPR001965 -
Pumo8g02501 1477 MobiDBLite consensus disorder prediction 436 623 - -
Pumo8g02501 1477 MobiDBLite consensus disorder prediction 583 611 - -
Pumo8g02501 1477 MobiDBLite consensus disorder prediction 224 247 - -
Pumo8g02501 1477 MobiDBLite consensus disorder prediction 492 512 - -
Pumo8g02501 1477 ProSiteProfiles Zinc finger PHD-type profile. 251 302 IPR019787 -
Pumo8g02501 1477 SUPERFAMILY FYVE/PHD zinc finger 240 302 IPR011011 -
Pumo8g02501 1477 MobiDBLite consensus disorder prediction 448 491 - -
Pumo8g02501 1477 MobiDBLite consensus disorder prediction 1109 1140 - -
Pumo8g02501 1477 MobiDBLite consensus disorder prediction 342 408 - -
Pumo8g02501 1477 MobiDBLite consensus disorder prediction 63 113 - -
Pumo8g02501 1477 MobiDBLite consensus disorder prediction 96 112 - -
Pumo8g02501 1477 MobiDBLite consensus disorder prediction 515 582 - -
Pumo8g02501 1477 PANTHER - 251 965 - -
Pumo8g02501 1477 MobiDBLite consensus disorder prediction 687 710 - -
Pumo8g02501 1477 MobiDBLite consensus disorder prediction 1123 1140 - -
Pumo8g02501 1477 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 236 327 IPR013083 -
Pumo8g02501 1477 MobiDBLite consensus disorder prediction 345 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02501 Pumo-Chr8 62150741 62159859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02501 250 337 C2H2 Transcription Factor Family AT3G01460 29.545 7.80e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02501 - - gmx:100806639 2661.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g02163 11 54029343 54039191 Pumo8g02501 8 62150741 62159859 ECH
Pumo8g02501 8 62150741 62159859 Pumo8g02501 8 62150741 62159859 ECH