Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02484 ATGCTAACGGTAGCTCCTTCTGTCGATGCCAAAGAGGTGTCTACCCCAAAAACTGAGCAAAACCAAGTGTGTGATCCCCAAACTACCCATGTCTTCAAATCAAAATTACCAGATATACCAATCTCCAACCACATCCCTCTCCACGCCTACTGCTTCGAGAAACTCTCCGACTTCGCTGACCGCCCCTGTCTCATCGTCGGCGCCGCCTCCAAAACCTACACCTACGCCGAGACGCACCTCATTTCGCGCAAGATCGCCGCCGGATTGTCCAACCTCGGAATCCGCAAAGGCGACGTGGTCATGATCCTCCTCCAGAACTCCGCCGAGTTTGTTTTCTCCTTCCTCGCCGCCTCCATGATCGGCGCCGTCGGCACCACCGCGAACCCGTTCTACACTGCCGCGGAGATCTTCAAGCAGTTCACCGTCTCCAAGGCGAAGCTGATCATAACGCAAGCAATGTACGTGGACAAGCTCCGCCACCACGACGGTGCGAACCTCGGCGAGGACTTCAAGGTGGTGACCGTGGACGATCCGCCGGAGAATTGCCTCCACTTCTCGGTGCTCTCGGAGGCGAACGAGAGCGAGGTGCCGGAGGTGGAGATCCACCCGGACGACGCGGTGGCGATGCCGTTCTCCTCCGGCACGACGGGTTTACCTAAAGGAGTGGTTCTCACGCACAAGAGTTTAACGACGAGCGTGGCGCAGCAGGTGGACGGAGAGAACCCTAACCTCTACCTCACCACCGAAGACGTGCTCCTCTGCGTGCTTCCGCTGTTTCACATATTCTCGCTCAACAGTGTGCTATTGTGCGCGCTCAGGGCCGGGAGTGGCGTTTTGCTGATGCAGAAGTTCGAGATTGGGACGCTGCTGGAGCTCATACAGCGGCACCGCGTATCGGTGGCGATGGTGGTGCCGCCGCTGGTGCTGGCGCTGGCCAAGAATCCGATGGTGGCGGATTTTGACCTCAGTTCAATACGGCTAGTGCTGTCCGGAGCGGCTCCCTTGGGGAAGGAACTCGAGGAGGCTCTCCGGAACAGGGTGCCTCAAGCTGTTTTGGGACAGGGGTACGGGATGACTGAAGCAGGACCAGTGCTGTCCATGTGCTTGGGCTTTGCAAAGCAACCATTCCCAACAAAATCAGGCTCTTGTGGTACCGTAGTCAGAAATGCAGAACTCAAGGTTGTTGACCCCGAAACTGGTCGTTCTCTTGGCTACAATCAACCCGGTGAAATTTGCATCCGAGGGCAACAGATCATGAAAGGATATCTGAACGATGAGAAAGCGACAGCATTGACCATAGATTCAGAGGGTTGGCTTCACACCGGTGATGTTGGCTATGTAGATGATGATGATGAAATTTTCATTGTTGACAGGGTGAAAGAACTCATCAAATTTAAAGGCTTCCAGGTGCCCCCTGCAGAACTTGAAGGGCTTCTTGTAAGCCATCCCTCCATTGCAGACGCAGCTGTTGTCCCACAAAAGGATGTTGCTGCTGGTGAAGTTCCTGTTGCCTTCGTTGTGAGATCAAACGGCTTTGATCTAACTGAAGAGGCTGTAAAAGAGTTTATAGCTAAACAGGTGGTGTTCTACAAAAGACTGCACAAAGTTTATTTTGTTCATGCTATTCCCAAGTCTCCATCAGGAAAGATATTAAGGAAAGACCTCAGAGCAAAGCTAGAAAGCGCCGCCACTCAGACGCCTTAA 1704 0.5376 MLTVAPSVDAKEVSTPKTEQNQVCDPQTTHVFKSKLPDIPISNHIPLHAYCFEKLSDFADRPCLIVGAASKTYTYAETHLISRKIAAGLSNLGIRKGDVVMILLQNSAEFVFSFLAASMIGAVGTTANPFYTAAEIFKQFTVSKAKLIITQAMYVDKLRHHDGANLGEDFKVVTVDDPPENCLHFSVLSEANESEVPEVEIHPDDAVAMPFSSGTTGLPKGVVLTHKSLTTSVAQQVDGENPNLYLTTEDVLLCVLPLFHIFSLNSVLLCALRAGSGVLLMQKFEIGTLLELIQRHRVSVAMVVPPLVLALAKNPMVADFDLSSIRLVLSGAAPLGKELEEALRNRVPQAVLGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVVDPETGRSLGYNQPGEICIRGQQIMKGYLNDEKATALTIDSEGWLHTGDVGYVDDDDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGFDLTEEAVKEFIAKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLESAATQTP 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02484 567 MobiDBLite consensus disorder prediction 1 21 - -
Pumo8g02484 567 Gene3D - 460 564 IPR045851 -
Pumo8g02484 567 CDD 4CL 41 555 - -
Pumo8g02484 567 FunFam 4-coumarate--CoA ligase 2 461 562 - -
Pumo8g02484 567 SUPERFAMILY Acetyl-CoA synthetase-like 39 561 - -
Pumo8g02484 567 FunFam Long-chain-fatty-acid--CoA ligase FadD 33 460 - -
Pumo8g02484 567 ProSitePatterns Putative AMP-binding domain signature. 209 220 IPR020845 -
Pumo8g02484 567 Pfam AMP-binding enzyme C-terminal domain 474 549 IPR025110 -
Pumo8g02484 567 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 28 557 - -
Pumo8g02484 567 Pfam AMP-binding enzyme 56 465 IPR000873 -
Pumo8g02484 567 Gene3D - 23 459 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02484 Pumo-Chr8 61983372 61988294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02484 26 472 Monolignol Biosynthesis Gene Families AT1G65060 72.889 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02484 K01904 - gmx:547492 1047.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02484 8 61983372 61988294 Pumo8g02484 8 61983372 61988294 ECH