Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02479 ATGCCAGCATTTGCTTCTGCTTCATCTAATGTTGTGACAGAAAAATCTGTCGAGTTGCCTACTTGCACAGACAACTTTCAATCTTTTCAGTCTTGTGGTGATGGCAGTGGTGGACTTAACCAATCAACCAGTTTACCTTTGCCAACATCAGAGATTCTTAGGATAACTGATTTACCCGATAAGTTTGATGATACTAGCTCAAATATTCCATTCTCTGAAGACAATAAGAGCTTGGCAGCTGCAATTCCTTCCCAACTGGATTCCCTAAATGCTATGCTTTCAGAGGATGCAGTTCATAATGGAACCAGAGATTGGCCTTCTAGCTTTGGTAAATCATCCGGAGAGGCTGCAGACATTTTTTCTGGGCTGGAATCCCTTGATGACTTTCTCACCCAAGGTGCCACTGGTACAGTGGTGATTGGAAAAATTGTGTGTGTAGGAAAACCAGCCCTTCATTCTTTCAATGAGAAGGGTGCAGAGGAAAATTTTGTCACACCTGCTTGTAGTTCTATTAACTCTTTTGGGGAATGTGATACTACTCAAGTTCAAAGGTGTCCCGAGTATCATACCCCCCAAGATTCATTAACCTTCAATGAAGATGCAGTTCTCAATGAGGATGATACTCACACTAAGAATAGAAGGTCGGAAACAGAGGACTTGAATCCTGCCTGCCCAGGTGATGATGTCTTTGATTATCAATCCATGAAATCTGGTGAAGATCCAACTTCTGGAATTCCAGTGCATGAAGAGTTGACAAATGCTGCAGATAGTCCCACATTGGCTGATTTTTTGCATGCAGATGTTACAAGGGAAAAAGAAGATTCTAATAAGAGAAAAAAGGATGGCTCAACATCATGTTCTCTAAGGAAGAACAGAAGATCTTCTATTGCTGGTGAGGAGGATAAAGGTGGTAAAATCTCAAGGCAGCTGAGGAAACAAGCAGCCCATAAACCTGCAAACAGCTCATTCAATGAGGATGTTGAAGATAATAATGACCTTGACCCTCCTTATAATTCTAATGGAGATGAACTTCAAGAAAATGATGACGACTATGAAGTCGATTATCCATCCAAGAAGAAAAGAGTATCAACAAGTTCACACAAGAAATCTGTGGCTAAAAGTGGAAAAACATCTCAAAAGCATAAGAAGAAGGCTAATGATGATTTAGAAAAAACTGAGGAACCTCCCAAAAAGTTCCCTCATTCAACCCGACGAAGAAAAAGATGCGTGGACAAGGCTCTGCTGGAAATTCCTGAGGATGAACTTGATCGTCTAAAAATACCTATTAAGGATGTTATTTTACTTGCAGAACATAGGGAGCGGCTGGCGAAAAAAGAGGCAATGACTTCAAATACGTCTTCCACCAATCAAAGTGTTGGAGATTCTCTTCATGAGGCTGGTGCTTATAATGAAGGGGAGTGGGCTTATAATGAAGGGGAGTTCTCAGGTTCAGAAGATGGTAGAAACCCATATGATGATCAAGCCAATGAAGGGATAACATCAACTAACCCTTTATTCAATTATCAGTCTTTCAGTGAAAAGGCACCTAGGGGAAAATGGTCAAAACAAGAAACTGAACTGTTTTACGAGGCTGTTAGGGAGATGGGCACAGATTTTTCTATGATACAAGAGATTTTCTTCCCTGATAAAACACGGCATCAAGTTAAGCTGAAGTACAAGAAGGAAGAGCGGCAGCAGCCTTCACGGTTAACTGATGCTGTAAATAACCGTGCAAAAGATCACCCTCGTTCTAATGTGTTGATTGAGCGACTACAACTAGCTTCCACCAAGGCAGAAGAAGACCCCAGTAGAGAGGCCTCAGATTTCGTGATGGCAGAGGAGGCTGTGGACCTAACAGCTGGAACTAATGTATGCACTTTTGGCCTGTTCAGTTTATCTTTAGATATCTCCCTTCTTTTGGTGCACCTAATTTATGATTTCAGTGGCTTATTTATCAGAGAAATATTCTTCATTGCATGA 1980 0.4116 MPAFASASSNVVTEKSVELPTCTDNFQSFQSCGDGSGGLNQSTSLPLPTSEILRITDLPDKFDDTSSNIPFSEDNKSLAAAIPSQLDSLNAMLSEDAVHNGTRDWPSSFGKSSGEAADIFSGLESLDDFLTQGATGTVVIGKIVCVGKPALHSFNEKGAEENFVTPACSSINSFGECDTTQVQRCPEYHTPQDSLTFNEDAVLNEDDTHTKNRRSETEDLNPACPGDDVFDYQSMKSGEDPTSGIPVHEELTNAADSPTLADFLHADVTREKEDSNKRKKDGSTSCSLRKNRRSSIAGEEDKGGKISRQLRKQAAHKPANSSFNEDVEDNNDLDPPYNSNGDELQENDDDYEVDYPSKKKRVSTSSHKKSVAKSGKTSQKHKKKANDDLEKTEEPPKKFPHSTRRRKRCVDKALLEIPEDELDRLKIPIKDVILLAEHRERLAKKEAMTSNTSSTNQSVGDSLHEAGAYNEGEWAYNEGEFSGSEDGRNPYDDQANEGITSTNPLFNYQSFSEKAPRGKWSKQETELFYEAVREMGTDFSMIQEIFFPDKTRHQVKLKYKKEERQQPSRLTDAVNNRAKDHPRSNVLIERLQLASTKAEEDPSREASDFVMAEEAVDLTAGTNVCTFGLFSLSLDISLLLVHLIYDFSGLFIREIFFIA 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02479 659 MobiDBLite consensus disorder prediction 206 227 - -
Pumo8g02479 659 SUPERFAMILY Homeodomain-like 518 566 IPR009057 -
Pumo8g02479 659 MobiDBLite consensus disorder prediction 362 380 - -
Pumo8g02479 659 Gene3D - 520 585 - -
Pumo8g02479 659 CDD SANT 519 561 IPR001005 -
Pumo8g02479 659 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 57 613 - -
Pumo8g02479 659 MobiDBLite consensus disorder prediction 269 406 - -
Pumo8g02479 659 ProSiteProfiles Myb-like domain profile. 512 563 IPR001005 -
Pumo8g02479 659 MobiDBLite consensus disorder prediction 206 221 - -
Pumo8g02479 659 MobiDBLite consensus disorder prediction 269 308 - -
Pumo8g02479 659 MobiDBLite consensus disorder prediction 381 400 - -
Pumo8g02479 659 SMART sant 516 565 IPR001005 -
Pumo8g02479 659 Pfam Myb DNA-binding like 510 585 IPR039467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02479 Pumo-Chr8 61909966 61915388 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo8g02479 Myb_DNA-bind_7 4.9e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02479 K15198 - gmx:100809837 1066.22