Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo8g02443 | ATGAGTGATTGCATGGACATGCCTTCTTCAAGTTCAAGCCATGTTGTTGGTGCTGCTTCTTCGGCATATCGTGGTGTCCGCAAGAGGAAATGGGGGAAGTGGGTGTCCGAAATCCGCGAGCCAGGAACCAAGACCAGAATCTGGCTCGGGAGTTTCGAAACTCCCGAGATGGCAGCAGCAGCATACGACGTCGCAGCGTTGCATTTCAGGGGCCGCGACGCCAGGCTCAACTTCCCTCAGCTCGCCAGCACGCTGCCGCGCCCCGTCAGCAACAATGCTGACCACATACGCATGGCGGCGCACGAGGCCGCGCTCAGGCTCCGGACCAACCCAGGCCCGCCGGAGACCGGTGGCTCCGCCGGTTCCGCCGCCGCGGCTCCACTCACGGTAAGGCTCTCCCCCACTCAGATTCAGGCCATCAATGACTCCCCTATGGACTCACCGACTTGGATGCAAATGCCTGACACGTTCATGATGCATGATCAGTCCATGATGTTCGCAAATGGGTATTCCTTTGAAGACAACGAGTGGGAGGATATGCAGAATGATTCTCTTTGGGATCCTTAG | 567 | 0.5802 | MSDCMDMPSSSSSHVVGAASSAYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAAAAYDVAALHFRGRDARLNFPQLASTLPRPVSNNADHIRMAAHEAALRLRTNPGPPETGGSAGSAAAAPLTVRLSPTQIQAINDSPMDSPTWMQMPDTFMMHDQSMMFANGYSFEDNEWEDMQNDSLWDP | 188 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo8g02443 | 188 | ProSiteProfiles | AP2/ERF domain profile. | 22 | 79 | IPR001471 | GO:0003700|GO:0006355 | |
Pumo8g02443 | 188 | FunFam | Ethylene-responsive transcription factor 2 | 21 | 80 | - | - | |
Pumo8g02443 | 188 | PRINTS | Ethylene responsive element binding protein signature | 23 | 34 | IPR001471 | GO:0003700|GO:0006355 | |
Pumo8g02443 | 188 | PRINTS | Ethylene responsive element binding protein signature | 45 | 61 | IPR001471 | GO:0003700|GO:0006355 | |
Pumo8g02443 | 188 | SMART | rav1_2 | 22 | 85 | IPR001471 | GO:0003700|GO:0006355 | |
Pumo8g02443 | 188 | CDD | AP2 | 21 | 79 | IPR001471 | GO:0003700|GO:0006355 | |
Pumo8g02443 | 188 | Pfam | AP2 domain | 22 | 71 | IPR001471 | GO:0003700|GO:0006355 | |
Pumo8g02443 | 188 | SUPERFAMILY | DNA-binding domain | 21 | 80 | IPR016177 | GO:0003677 | |
Pumo8g02443 | 188 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 14 | 164 | - | - | |
Pumo8g02443 | 188 | Gene3D | AP2/ERF domain | 22 | 80 | IPR036955 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo8g02443 | Pumo-Chr8 | 61575554 | 61576120 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo8g02443 | 21 | 188 | AP2-EREBP Transcription Factor Family | AT1G71450 | 64.118 | 4.64e-66 | 199 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Pumo8g02443 | AP2 | 3.9e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo8g02443 | - | - | gmx:100815719 | 335.109 |