Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02432 ATGGGGTGCATCTGCTCAAAAAACTCTTCAGACAAAGTTGATGAATATGAGAAAGAAAAAGAAAAAGAAAAAGAGTCGAACAAGTCTTCAGTACAACTGGTTGCTCCTGCTGTCTCAACTGCACAGATAGATGGTGGTAGCACGGATGGTTCGGTGCCCCGAATGGCAAAGTCTTCATCACAAGTGATTAGAGGGTCTGTCAAAGTGCCATCAGAGGATAAAAGCAACCACTTAGATGCCACAAGAAGCCAGCACCAGAGGTGCAACACGATGAGTGGTGGTGTAGGTGAAAAAAAACCACTAATGAGTAGAATACTTAGCGTGCAACATATTGCAGGAGAACATGTTGATGCTGGATGGCCATTGTGGTTATCTTCAGTGGCAGCAGAAGCCATCAAAGGGTGGGTGCCTCGACGGGCAGACTCTTTTGAAAAATTAGACCAAATTGGACAAGGGGCTTATAGCAGTGTGCATAAAGCTCGTGACCTTGAGACTGGTAAAATTGTGGCTTTGAAGAAGGTTCGCTTTTCAAGTACAGATGCAGAAAGTGTCCGGTTCATGGCAAGGGAAATCTATATATTGCGTCGACTTGACCATCCTAATGTCATGAAGCTTGAGGGTCTTGTCACGTCTAGAACGTCCACCAGTTTGTACCTTGTTTTTGAATACATGGAGCATGACCTTGCTGGCCTAGCAACTATACATGGAGTGAAGTTAACTGAACCACAGATAAAATGTTATATGCAGCAACTGCTTCGTGGCCTTGAACACTGCCATAGCCGGGGTGTGCTGCACCGAGACATCAAGGGTTCAAATCTTCTGATTGACAACAATGGAAATCTTAAGATTGCAGATTTTGGTCTTTCAACAGTTTATGATCCTGATAAAAAACAGCCATTGACTAGCCGTGTTGTGACTCTCTGGTATAGGGCACCTGAGCTTTTGCTAGGCGCTACAGATTATGGAGCTGCAATTGACATGTGGAGTGTTGGTTGCATTCTAGCCGAACTGCTAGTCGGGAAACCAATCATGCCTGGAAGAACAGAGGTGGAACAAATGCACAAAATTTTTAAACTTTGTGGTTCACCATCTGAAGACTATTGGCAGAGAACAAAATTACCCCATGCAACAAGTTTTAAGCCACAACACGCTTACAACCGCCAAGTTTCCGAAACATTTAAAAACTTCTCTCCCACAGCATTGGCTCTTGTTGATAAGCTTCTTACAATCGAACCAGAAGATCGAGGATCAGCAACTTCTGCACTTGAGAGTGAGTTCTTCACTACAAACCCCTTACCTTGTGATCCCTCAAGTTTACCAAAGTTTTCACCAAGCAAGGAGTTTGATTCCAAGCGTCGAGAAAAGGAAGCTACAAGGAAAAATGTCGAAGCTGTTAAAGGACGTGGACCAGCATCTGTTTTTAGGGGAGCAGGAGATACCAAAGTACTAGGTTCACCAGAGTATATCACTGGGGGAAATATTTCTATGGGGGGCAAGTCAAATACTAGAATGTCCCGTCTTAAATATCAATCCCAAGAGGATGGCGAGTCCAACGACAATGGTGTACCAACCAGAATAAGTCTACACAATGGCTACACACATTCTACTTCAATGATGCACAGCAGTATGGCAGGACCATCCTCATTGAGTAAGAGACCAGAATCATCTTGGAAGAATCCAGAATTACGGTCACAGAGGTCTCATGTGAATCATGCTGCAGCAGATTTATCTACCTCTTCCGTTAAAAAGGAACCGGGCATGTCTGTTCGTGAACCTGGGATGGGTTATGTGCCGAAGAAAAATAGGATCCACTGCTCTGGACCATTGATGCCTCCGGGTGGCAACATTGATGACATGCTGAAAGAGCATGAGCGATTAATGCAAGATGTTTTCCGTAGTGTCAAAAAGGCCAATCCGTGA 1920 0.4427 MGCICSKNSSDKVDEYEKEKEKEKESNKSSVQLVAPAVSTAQIDGGSTDGSVPRMAKSSSQVIRGSVKVPSEDKSNHLDATRSQHQRCNTMSGGVGEKKPLMSRILSVQHIAGEHVDAGWPLWLSSVAAEAIKGWVPRRADSFEKLDQIGQGAYSSVHKARDLETGKIVALKKVRFSSTDAESVRFMAREIYILRRLDHPNVMKLEGLVTSRTSTSLYLVFEYMEHDLAGLATIHGVKLTEPQIKCYMQQLLRGLEHCHSRGVLHRDIKGSNLLIDNNGNLKIADFGLSTVYDPDKKQPLTSRVVTLWYRAPELLLGATDYGAAIDMWSVGCILAELLVGKPIMPGRTEVEQMHKIFKLCGSPSEDYWQRTKLPHATSFKPQHAYNRQVSETFKNFSPTALALVDKLLTIEPEDRGSATSALESEFFTTNPLPCDPSSLPKFSPSKEFDSKRREKEATRKNVEAVKGRGPASVFRGAGDTKVLGSPEYITGGNISMGGKSNTRMSRLKYQSQEDGESNDNGVPTRISLHNGYTHSTSMMHSSMAGPSSLSKRPESSWKNPELRSQRSHVNHAAADLSTSSVKKEPGMSVREPGMGYVPKKNRIHCSGPLMPPGGNIDDMLKEHERLMQDVFRSVKKANP 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02432 639 ProSiteProfiles Protein kinase domain profile. 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02432 639 SUPERFAMILY Protein kinase-like (PK-like) 136 435 IPR011009 -
Pumo8g02432 639 MobiDBLite consensus disorder prediction 534 602 - -
Pumo8g02432 639 FunFam probable serine/threonine-protein kinase At1g54610 130 225 - -
Pumo8g02432 639 PANTHER CELL DIVISION PROTEIN KINASE 141 433 - -
Pumo8g02432 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Pumo8g02432 639 MobiDBLite consensus disorder prediction 534 555 - -
Pumo8g02432 639 ProSitePatterns Protein kinases ATP-binding region signature. 149 172 IPR017441 GO:0005524
Pumo8g02432 639 MobiDBLite consensus disorder prediction 10 28 - -
Pumo8g02432 639 MobiDBLite consensus disorder prediction 445 463 - -
Pumo8g02432 639 Gene3D Transferase(Phosphotransferase) domain 1 226 467 - -
Pumo8g02432 639 Coils Coil 6 33 - -
Pumo8g02432 639 Gene3D Phosphorylase Kinase; domain 1 130 225 - -
Pumo8g02432 639 MobiDBLite consensus disorder prediction 433 466 - -
Pumo8g02432 639 Pfam Protein kinase domain 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02432 639 CDD STKc_CDK9_like 143 427 - -
Pumo8g02432 639 MobiDBLite consensus disorder prediction 29 66 - -
Pumo8g02432 639 MobiDBLite consensus disorder prediction 570 584 - -
Pumo8g02432 639 MobiDBLite consensus disorder prediction 1 95 - -
Pumo8g02432 639 FunFam probable serine/threonine-protein kinase At1g54610 226 467 - -
Pumo8g02432 639 SMART serkin_6 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02432 Pumo-Chr8 61500283 61504693 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02432 135 466 Core Cell Cycle Gene Families AT5G10270 52.738 2.27e-122 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pumo8g02432 Pkinase 6.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02432 K08819 - gmx:100791743 1109.36