Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02420 ATGGAATCTATGTTTCAAGAAGAAGGGTCATCTTCTGTAACTTCTTCACCTCTTCAGTTCTTTTCCATGATGTCTCTTTCACCTGGCATAGGAATAGGATCTCCCCTTCCTTGGTCTAGAGAACTGCAATCTGAGGAGAGGGGTTTGTTATTGATCCATTTGTTGCTGGCTGGTGCAAATTATGTAGCTACTGGTAGTTTTAAAGATGCAAACAGCACACTTGAGAAGATTTCCCAGCTTGCCTCTCCTGATGGGGATACTATGCAGCGAATTGCTTCATATTTCACTGAAGCACTCGCTGATCGGGTACTCAAAACATGGCCTGGCATCCATAAGGCCCTCAATTCCACCAGAATACCTATGGTTTCGGAAGAAATTCGTGTTCAGAAGCTCTTCTTTGAGCTTTTGCCCTTCTTGAAGTTTTCCTATATTCTGACAAATCAGGCTATTGTTGAAGCCATGGAAGGGGAGAAAATGGTGCATATAATTGATCTTAATGCCACCGGACCAGCACAGTGGATTGCTCTCCTCCAAGTCCTGAGTGCACGTCCCGAAGGCCCTCCCCATTTGAGAATCACTGGGGTTCATCACCAGAAAGAGGTTCTGGATCAGATGGCTCACCAACTCACTGAAGAGGCAGAAAAATTGGATATCCCATTCCAATTCAACCCTGTGGTCAGCAAGTTAGAAAATCTTGATTTTGACAAACTTCGCGTTAAAACTGGGGAGGCACTAGCAATAAGTTCTATTCTGCAGTTGCACACCCTTTTGGCCTTGGATGATGATGCCTTGCGGAGAAAATCACCTCTTTTGTCAAAAAATTCAAATGCAATTCACCTGCAGAAAGGCCTGCTGATGAACCAAAACACCTTGGGTGGTTTGCTTGAAAAGGATGTGATTAATGGCTATAGCCCAAGTCCTGATTCAGCCTCAGCCTCATCCTCGCCAGCGTCTTCATCTGCTTTGATGAATTCGGAGAGCTTTCTTAATGCCTTGTGGGGGTTATCACCAAAGGTCATGGTTGTAACTGAACAAGACTCTAATCACAACAGTTTGACCCTGCTGGAGAGGCTGCCAGAAGCTCTATTTTCTTATGCTGCATTGTTTGATTGTTTGGAATCCACTGTCTCAAGAGCATCCTTGGACAGAATAAAAGTTGAGAAGATGCTTTTGGGTGAGGAAATCAAGAACATCATAGCTTGTGAGGGAGCTGAAAGAAAGGAAAGGCATGAAAAGATGGATAAGTGGATCCAGAGACTTGACTTATCTGGCTTTGCAAACGTGCCTATAAGCTATTATGGTATGTTGCAGGCAAGGAGGTTCTTGCAGACCTATGGTTGTGATGGGTATAAGATGAGGGAGGAAAATGGTTGTGTAATGATTTGCTGGCAGGACCGATCCTTGTTCTCTATAACAGCTTGGAGACCAAGGAAGTAA 1437 0.4419 MESMFQEEGSSSVTSSPLQFFSMMSLSPGIGIGSPLPWSRELQSEERGLLLIHLLLAGANYVATGSFKDANSTLEKISQLASPDGDTMQRIASYFTEALADRVLKTWPGIHKALNSTRIPMVSEEIRVQKLFFELLPFLKFSYILTNQAIVEAMEGEKMVHIIDLNATGPAQWIALLQVLSARPEGPPHLRITGVHHQKEVLDQMAHQLTEEAEKLDIPFQFNPVVSKLENLDFDKLRVKTGEALAISSILQLHTLLALDDDALRRKSPLLSKNSNAIHLQKGLLMNQNTLGGLLEKDVINGYSPSPDSASASSSPASSSALMNSESFLNALWGLSPKVMVVTEQDSNHNSLTLLERLPEALFSYAALFDCLESTVSRASLDRIKVEKMLLGEEIKNIIACEGAERKERHEKMDKWIQRLDLSGFANVPISYYGMLQARRFLQTYGCDGYKMREENGCVMICWQDRSLFSITAWRPRK 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02420 478 ProSiteProfiles GRAS family profile. 42 475 IPR005202 -
Pumo8g02420 478 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 48 470 IPR005202 -
Pumo8g02420 478 Pfam GRAS domain family 51 475 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02420 Pumo-Chr8 61403900 61406311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02420 1 478 GRAS Transcription Factor Family AT1G50420 65.021 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo8g02420 GRAS 5.4e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02420 - - gmx:100775380 734.947