Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02419 ATGAGTGCCACTTCCTCCACCCTCTCCACCGTCACCGACGCCAATCTTGGCACCAGATTTCATTCTTGTCTTATGCCATTCACTGTCACCACTCATTTCTCACTTTCTCAGCCCAAACGGATTTCTTCAATCAGATGCCAATCAATTAATACCGATAAGAAGAAATCAAGTAGAAATCTGCTGGACAACGCAAGTAACCTCCTTACGGACTTGTTAAGTGGTGGAAGTATAGGGTCTATGCCCATAGCTGAAGGTGCAGTCTCAGATCTGTTTGGTCGACCTCTCTTTTTCTCACTATATGATTGGTTCTTGGAGCATGGCGCGGTGTATAAACTTGCCTTTGGACCAAAAGCATTTGTCGTTGTATCAGATCCCATAGTTGCCAGACATATTCTGCGAGAAAATGCATTTTCTTATGACAAGGGAGTACTTGCTGATATCCTAGAACCAATAATGGGCAAAGGACTCATACCAGCAGACCTTGATACTTGGAAGCAAAGGAGAAGAGCCATTGCTCCAGCTTTCCATAACTCATACTTGGAAGCTATGGTCAAAATATTCACAGCTTGTTCAGAAAGAACGATATTGAAGTTTAATAAGCTTCTTGAAGGAGAGGGTTATGATGGACCTAACTCAATTGAATTGGATCTTGAGGCAGAGTTTTCTAGTTTGGCTCTTGATATTATTGGGCTTGGTGTGTTCAACTATGACTTTGGTTCTGTCACCAAAGAATCTCCAGTTATTAAGGCAGTCTATGGCACTCTTTTTGAAGCTGAACATCGATCCACTTTCTACATTCCATATTGGAAAATTCCATTGGCAAGGTGGATAGTCCCAAGGCAAAGAAAGTTTCAGGATGACCTAAAGGTCATCAATACTTGTCTTGACGGACTTATCAGAAATGCAAAAGAGAGCAGAGAGGAAACAGATGTTGAGAAATTGCAGCAGAGGGATTACTTAAATTTGAAGGATGCAAGTCTTCTGCGTTTCCTGGTTGATATGCGGGGAGCTGATGTTGATGATCGTCAGTTGAGGGACGATTTAATGACAATGCTTATTGCTGGTCATGAAACAACGGCTGCAGTTCTTACTTGGGCAGTTTTCCTCCTAGCTCAAAATCCTAGCAAAATGAAGAAGGCACAAGCAGAGATAGATTCGGTGCTGGGTACGGGGAGGCCAACTTTTGAATCACTTAAAGAATTGCAGTACATTAGATTGATTGCTGTGGAGGCTCTTCGTTTATACCCCCAACCACCTTTGCTGATTAGACGTTCACTCAAATCTGATGTTTTACCAGGTGGGCACAAAGGTGATAAAGATGGTTATGCAATTCCTGCTGGGACTGATGTCTTCATTTCTGTATATAATCTCCATAGATCTCCATATTTTTGGGACCGCCCTCATGACTTCGAACCAGAGAGATTTCTAGTGCAAAACAAGAATGAAGAAATTGAAGGATGGGCAGGTTTTGATCCATCTCGAAGTCCTGGAGCCTTGTATCCGAACGAGGTTATATCGGATTTTGCATTCTTGCCTTTTGGTGGCGGACCACGAAAATGTGTTGGGGACCAATTTGCTCTCATGGAGTCCACTGTAGCGTTGACTATGCTGCTCCAGAATTTTGACGTGGAACTGAAGGGGACCCCTGAATCGGTGGAACTAGTTACTGGGGCAACTATTCATACCAAAAATGGAATGTGGTGCAAATTGAATAAGAGATCTAATTCATATTGA 1734 0.4268 MSATSSTLSTVTDANLGTRFHSCLMPFTVTTHFSLSQPKRISSIRCQSINTDKKKSSRNLLDNASNLLTDLLSGGSIGSMPIAEGAVSDLFGRPLFFSLYDWFLEHGAVYKLAFGPKAFVVVSDPIVARHILRENAFSYDKGVLADILEPIMGKGLIPADLDTWKQRRRAIAPAFHNSYLEAMVKIFTACSERTILKFNKLLEGEGYDGPNSIELDLEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKIPLARWIVPRQRKFQDDLKVINTCLDGLIRNAKESREETDVEKLQQRDYLNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKMKKAQAEIDSVLGTGRPTFESLKELQYIRLIAVEALRLYPQPPLLIRRSLKSDVLPGGHKGDKDGYAIPAGTDVFISVYNLHRSPYFWDRPHDFEPERFLVQNKNEEIEGWAGFDPSRSPGALYPNEVISDFAFLPFGGGPRKCVGDQFALMESTVALTMLLQNFDVELKGTPESVELVTGATIHTKNGMWCKLNKRSNSY 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02419 577 CDD CYP97 97 567 - -
Pumo8g02419 577 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 513 522 IPR017972 GO:0005506|GO:0016705
Pumo8g02419 577 Gene3D Cytochrome P450 79 577 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02419 577 PRINTS E-class P450 group I signature 363 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02419 577 PRINTS E-class P450 group I signature 510 520 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02419 577 PRINTS E-class P450 group I signature 103 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02419 577 PRINTS E-class P450 group I signature 343 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02419 577 PRINTS E-class P450 group I signature 520 543 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02419 577 PRINTS P450 superfamily signature 406 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02419 577 PRINTS P450 superfamily signature 354 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02419 577 PRINTS P450 superfamily signature 511 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02419 577 PRINTS P450 superfamily signature 520 531 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02419 577 PANTHER CYTOCHROME P450 FAMILY 4 105 573 - -
Pumo8g02419 577 Pfam Cytochrome P450 103 568 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo8g02419 577 SUPERFAMILY Cytochrome P450 91 573 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02419 Pumo-Chr8 61391016 61399711 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02419 19 575 Cytochrome P450 AT4G15110 78.136 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02419 K24543 - gmx:606504 1105.89