Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02414 ATGAGGGACTTTAAAGGAAGTGCCGATGATTTTGCAGTTGAAGGTGCTGCGGGTGTCACTGGAGTGTCATGGCCTGTTTTCAAATGGAGTGGTGGAAGAGATGATAAATACTTTGCAAGGATGGGGAAAAATATACTCTCTGTATATGAGACAGAGACCTTTTCTCTCGTTGACAAGAAATCCTTAAAGGTTGAAAATATAATGGATTTCAGCTGGTCTCCAACTGATCCAATCATTGCTCTCTTTGTTCCTGGGGTGGGAGGTGGTAACCAGCCTGCCAGGGTTAGTCTGATTCAAATCCCCAGCAAAGCGGAACTCAGGCAGAAGAACCTTTTCAGTGTCAGTGACTGCAAAATGTACTGGCAAAGCAATGGAGACTACCTCGCTGTTAATGTAGAGAGGTACACGAAAACGAAAAAAAGCACATACACAGGCTTTGAGCTTTTCCGTATAAAAGAACGGGATATACCAATTGAAGTTTTGGAGCTTGATAATAAGAATGATAAGATCATTGCGTTTGCTTGGGAGCCAAAGGGCCACAGGTTTGCAGTTATTCATGGTGATAACCCTAAGCCTGATGTTAGCATTTACTCCTTGCGTACTGGTCAGAACAGCCGAGTTTCAAAACTCACTACTCTGAAAGGCAAGCAAGCAAATGCTCTGTTTTGGTCACCTGCTGGTCGCTACATTGTACTAGCTGGGTTGAAAGGCTTCAATGGACAGTTGGAATTTTACAACGTTGATGAACTTGAAACAACGGCTACTGCTGAACATTTTATGGCAACAGATATTGAATGGGATCCTACTGGAAGGTATGTTGCAACTGCTGTGACTTCAGTTCATGAAATGGAGAATGGTTTCAATATATGGTCTTTCAATGGCAAACATCTATATCGGATTCTGAAGGATCACTTCTTTCAGTTCTTATGGAGACCAAGGCCACCATCTTTCTTGACTCCTGAGAAAGAGGAAGAGATTGCCAAGAACTTGAAGAAGTACAGTAAGAAATACGAGGCGGAAGATCAAGATGTTTCATTGCTGCTGAGTGAGCAGGAGCGTGAGAAACGTAGGATGTTGAAAGAAGAGTGGGACAAGTGGGTTAACGAATGGAAGCGGATCCACGAAGAAGAGAGTTTACAGAGGCAGAAGCTTAGGGATGGAGAGGCTAGCGAGGAATACGAGGCAAAGGACATCGAGGTGGAGGAAGTGATCGATGTAACAGAAGGGGTCCTTCATCTTGAGTATGGTCAAGAGTGA 1257 0.4375 MRDFKGSADDFAVEGAAGVTGVSWPVFKWSGGRDDKYFARMGKNILSVYETETFSLVDKKSLKVENIMDFSWSPTDPIIALFVPGVGGGNQPARVSLIQIPSKAELRQKNLFSVSDCKMYWQSNGDYLAVNVERYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDNPKPDVSIYSLRTGQNSRVSKLTTLKGKQANALFWSPAGRYIVLAGLKGFNGQLEFYNVDELETTATAEHFMATDIEWDPTGRYVATAVTSVHEMENGFNIWSFNGKHLYRILKDHFFQFLWRPRPPSFLTPEKEEEIAKNLKKYSKKYEAEDQDVSLLLSEQEREKRRMLKEEWDKWVNEWKRIHEEESLQRQKLRDGEASEEYEAKDIEVEEVIDVTEGVLHLEYGQE 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02414 418 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 1 405 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Pumo8g02414 418 SUPERFAMILY DPP6 N-terminal domain-like 28 311 - -
Pumo8g02414 418 Gene3D - 31 312 IPR015943 GO:0005515
Pumo8g02414 418 Pfam Eukaryotic translation initiation factor eIF2A 109 308 IPR013979 -
Pumo8g02414 418 FunFam Eukaryotic translation initiation factor 3 subunit B 114 328 - -
Pumo8g02414 418 Hamap Eukaryotic translation initiation factor 3 subunit B [EIF3B]. 8 412 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02414 Pumo-Chr8 61360767 61362760 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02414 1 412 Eukaryotic Initiation Factors Gene Family AT5G27640 79.616 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02414 K03253 - gmx:100779711 816.994