Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02396 ATGAAAACAGATCCAAGCAGTGGTGAGATGCATTCCACCAAGAGTATCAAATCTAAACAAGTTGAACGATGCTACGATAACTACCGGAAGAAGCGAAAGCGTCCGTGCAAGGTTGATGTGGTTCCCACCATGACCGCCGCCACATCACACGGTTTCATATCGGTGATAGGGCGGCGGCGTGTGATGGAGGACGCGGTGAAGGTGGTTCCTGGTTTGGTGGCGGCGGAGCAGCGTTGTGGCGGTTACGATTTTTTTGCTGTTTACGACGGCCACGGTGGGATGCCGGTAGCTAACGCTTGCCGCGACAGGTTGCACTTGTTGTTGGCGGAGGAAGTGAGGGAGAGCGCAGAGAAAGAGTTTGATTGGTGCGAGGTGATGTGTTCGTGTTTCATGAAGATGAACAAGGAAATTGGAGTCGGTGAGGAGCACGATGCTGGCGGCGGGAACACGATGGGTTCGACGGCGGCGGTGGTGGTGGTCGGAAAGGAGGAGATTGTGTTGGCGAATTGTGGAGACTCGAGGGCGGTGTTGTGCCGTGGTGGTGTAGCTGTCCCACTTTCACGTGACCATAAGCCTGATCGTCCAGATGAAAAAGAGAGGATAGAAGCAGCAGGTGGGAGAGTCATTAATTGGAACGGAAATCGTGTCTTGGGAGTACTTGCTACTTCCAGATCCATAGGGGATCACTGCATGAAGCCATTTGTGATTTCTCAACCAGAGACCAACGTGTACGCACGAACAGAGTCAGATGAGTTTGTTGTGGTGGCGAGTGACGGGCTGTGGGATGTGGTGTCTAACAAGTTTGTTTGTGAGGTTGTACGAGGTTGCCTCCATGGGAAAATGAGGAGGAACTTGAAAGAGGACTCCATGATAAGCTATGCAACAGAAGCCGCAGCGTTGTTGGCCGAGTTGGCTATGGCTCGTGGAAGCAAAGACAACATCAGTGTCATCGTCATTCAACTCAAGAATTCAACTTGA 978 0.5184 MKTDPSSGEMHSTKSIKSKQVERCYDNYRKKRKRPCKVDVVPTMTAATSHGFISVIGRRRVMEDAVKVVPGLVAAEQRCGGYDFFAVYDGHGGMPVANACRDRLHLLLAEEVRESAEKEFDWCEVMCSCFMKMNKEIGVGEEHDAGGGNTMGSTAAVVVVGKEEIVLANCGDSRAVLCRGGVAVPLSRDHKPDRPDEKERIEAAGGRVINWNGNRVLGVLATSRSIGDHCMKPFVISQPETNVYARTESDEFVVVASDGLWDVVSNKFVCEVVRGCLHGKMRRNLKEDSMISYATEAAALLAELAMARGSKDNISVIVIQLKNST 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02396 325 CDD PP2Cc 49 321 IPR001932 -
Pumo8g02396 325 FunFam Protein phosphatase 2C 51 43 325 - -
Pumo8g02396 325 Pfam Protein phosphatase 2C 50 314 IPR001932 -
Pumo8g02396 325 ProSitePatterns PPM-type phosphatase domain signature. 84 92 IPR000222 GO:0043169
Pumo8g02396 325 Gene3D - 42 325 IPR036457 -
Pumo8g02396 325 PANTHER PROTEIN PHOSPHATASE 29 321 IPR015655 GO:0004722|GO:0006470
Pumo8g02396 325 SUPERFAMILY PP2C-like 41 323 IPR036457 -
Pumo8g02396 325 SMART PP2C_4 39 319 IPR001932 -
Pumo8g02396 325 ProSiteProfiles PPM-type phosphatase domain profile. 49 321 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02396 Pumo-Chr8 61177697 61179344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02396 46 322 PP2C-type Phosphatase Gene Family AT2G29380 49.135 5.45e-86 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02396 K14497 - gmx:100813248 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02396 8 61177697 61179344 Pumo8g02396 8 61177697 61179344 ECH