Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02381 ATGGAACGCATTTTGTGCTTCATCTACTTGGTTTCTCTCTTGCTCTCCCAAGCAAATGCAGAACCCATCTCAGACAAGCAAGCATTGCTTGACTTGGTGGAAAAGTTGCCTCCTTCAAGATCCCTGAATTGGAACGCAACCTCTTCCCCATGTACCTCTTGGACCGGTGTAACCTGTAACCGAGACAAGTCACGAGTTATAGCCATTCACTTGCCAGGTTTCGGCTTTCACGGAACCATCCCTCCCAATACAATAAGCCGCCTCACGGGCTTGCAAACTCTCAGTCTCAGATCCAACTTCATAAATGGTCACTTCCCTTCTCATTTTTCCAATCTCAAAAACCTTTCCTTTCTTTATCTTCAGTTCAACAATTTCACGGGTCCCTTACCGGATTTCTCTGTTTGGAGGAACCTCTCTGTTGTCAACTTGTCCAATAATTTTTTCACTGGCAGCATTCCTCTCTCGCTCTCCAATTTGACTCAGCTAACTGCCATGAATCTCGCCAACAACTCGCTCTCTGGGGAAATCCCTCTCTCTCTTCAAAGGTTTCCCAAGTCAGCATTCGTTGGAAACAATGTTTCTCTTGAAATCTCTCCTGTAGCTCCATTTTCTAAATCTGCAAAACACCGCGAAACGGCGGTGTTTTGGGTCATTGTTGCTGCTGCTGCTCTTATTGGACTTGCAGCATTTGTTGCTTTTATCTTTGTATGCTGGTCGAGAAAGAAGAATGGGGATTCCTTTGCTCGGAAGTTGCAGAAGGGAGATATGTCTCCCGAAAAAGTAGTGTCGAGGGACCAGGATGCAAATAATAAAATTGTTTTCTTTGAGGGGTGTAGTTATGCCTTTGACTTGGAGGATTTGTTGAGGGCCTCTGCTGAGGTATTGGGGAAGGGGACGTTTGGTGCTGCATATAAAGCTGCGCTAGAGGATGCTACCACTGTTGTTGTGAAGAGGTTGAAGGAGGTGGCTGTTGGAAAGAGGGACTTTGAGCAGCTCATGGAGGTTGTTGGGAATCTTAAACATGAGAATGTGGTTGAGCTAAAGGGGTATTACTATTCCAAAGATGAGAAACTCATGGTCTATGATTACTACACTCAGGGGAGTCTCTCTGCTTTGTTGCATGGTAAAAGAGGAGAGGATAGGGTGGCATTAGATTGGGATACTCGGATGAAAATTGCTTTGGGTGCTGCACGAGGCCTTGCTCGTATCCATTGCGAGAATGGGGGGAAGCTTGTACATGGCAATATCAGATCCTCAAATATCTTTCTCAATAGTAAACAGTATGGTTGTGTATCTGATCTTGGCCTGGCAACCATAATGAGTTCAGTTGCCATACCCATCTCGCGAGCTGCCGGTTACAGAGCACCTGAAGTTACAGACACCAGGAAAGCGACACAACTTTCTGATGTTTACAGCTTTGGTGTGGTGTTACTAGAGCTTCTTACTGGGAAATCCCCTGTCTACACAACTGGTGGAGATGAGATTGTGCACTTGGTGAGATGGGTTCATTCGGTTGTGAGAGAAGAGTGGACAGCCGAAGTGTTTGACTTAGAGCTGATCAGATATCCCAATATAGAGGAAGAGATGGTGGAAATGTTGCAGATAGCCATATCATGTGTGGTGAGGGTTCCTGATCAGAGGCCAAAGATGTCTGAAGTTGTTAAAATGATAGAAAATGTTAGGCAGATTGATATAGTAGTGAATCAGCCATCATCTGAGAACCAAGTGGAAAGTTCAACTTCAACACAGACCCCTTTAATCACTTAA 1767 0.4499 MERILCFIYLVSLLLSQANAEPISDKQALLDLVEKLPPSRSLNWNATSSPCTSWTGVTCNRDKSRVIAIHLPGFGFHGTIPPNTISRLTGLQTLSLRSNFINGHFPSHFSNLKNLSFLYLQFNNFTGPLPDFSVWRNLSVVNLSNNFFTGSIPLSLSNLTQLTAMNLANNSLSGEIPLSLQRFPKSAFVGNNVSLEISPVAPFSKSAKHRETAVFWVIVAAAALIGLAAFVAFIFVCWSRKKNGDSFARKLQKGDMSPEKVVSRDQDANNKIVFFEGCSYAFDLEDLLRASAEVLGKGTFGAAYKAALEDATTVVVKRLKEVAVGKRDFEQLMEVVGNLKHENVVELKGYYYSKDEKLMVYDYYTQGSLSALLHGKRGEDRVALDWDTRMKIALGAARGLARIHCENGGKLVHGNIRSSNIFLNSKQYGCVSDLGLATIMSSVAIPISRAAGYRAPEVTDTRKATQLSDVYSFGVVLLELLTGKSPVYTTGGDEIVHLVRWVHSVVREEWTAEVFDLELIRYPNIEEEMVEMLQIAISCVVRVPDQRPKMSEVVKMIENVRQIDIVVNQPSSENQVESSTSTQTPLIT 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02381 588 FunFam Probable inactive receptor kinase RLK902 22 181 - -
Pumo8g02381 588 FunFam pollen receptor-like kinase 1 258 363 - -
Pumo8g02381 588 ProSitePatterns Protein kinases ATP-binding region signature. 295 326 IPR017441 GO:0005524
Pumo8g02381 588 Gene3D Ribonuclease Inhibitor 23 199 IPR032675 -
Pumo8g02381 588 Gene3D Transferase(Phosphotransferase) domain 1 365 581 - -
Pumo8g02381 588 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Pumo8g02381 588 PANTHER OS05G0588300 PROTEIN 3 572 - -
Pumo8g02381 588 Pfam Leucine rich repeat 79 125 IPR001611 GO:0005515
Pumo8g02381 588 SUPERFAMILY L domain-like 35 186 - -
Pumo8g02381 588 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 364 571 - -
Pumo8g02381 588 Gene3D Phosphorylase Kinase; domain 1 256 363 - -
Pumo8g02381 588 ProSiteProfiles Protein kinase domain profile. 289 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02381 588 Pfam Protein kinase domain 292 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02381 588 SUPERFAMILY Protein kinase-like (PK-like) 293 557 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02381 Pumo-Chr8 61012875 61015890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02381 18 585 Receptor kinase-like Gene Family AT4G23740 61.650 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo8g02381 Pkinase 3.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02381 - - gmx:100783234 1058.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02381 8 61012875 61015890 Pumo6g00435 6 5454169 5458485 PCT