Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02370 ATGGGGAACTGTAACAGCGAAGCATCTTCCCAAACCGAAACCGATCGACATTCCGATCACCATCACCACCCCCAACCCTCGAACTCCAACTCCAACGGCATCACCGTCCTCCCTCCCAATTCCAAGCCCTCCGTGGGCCGGGTTCTGGGCCGGCCCATGGAGGACGTCCGCTCCACCTACACCTTCGGCCGCGAACTGGGCCGCGGCCAATTTGGCGTCACCTACCTAGCGACCCACAAACACACCAAACAACAATTCGCGTGCAAGTCCATCGCCACGCGCAAGCTGGTCCACCGCGATGACTTGGAGGACGTCCGGCGCGAGGTGCAGATCATGCACCACCTCACCGGCCACCGCAACATCGTCGAGCTCAAGGGTGCTTACGAGGACCGCCACTCCGTCAACCTCATCATGGAGCTCTGCGCCGGCGGCGAGCTCTTCGACCGGATCATTGCTAAGGGCCACTACTCCGAGCGCGCCGCCGCCGACCTCTGCCGCCAGATCGTCACGGTGGTCCACGATTGCCACACCATGGGAGTCATGCACAGGGATCTCAAGCCGGAGAACTTCCTGTTCCTCAGCAAGGACGAGAACTCGCCGCTTAAGGCCACGGACTTCGGTCTCTCCGTGTTCTTCAAGCCGGGCGATGTGTTTAAGGATCTTGTTGGGAGTGCGTACTATGTTGCTCCTGAGGTGCTGCGTAGAAGTTATGGACCCGAAGCTGATATTTGGAGTGCTGGGGTTATATTGTTCATTCTGCTCTGTGGTGTCCCTCCCTTCTGGGCAGAAAAGGAACAGCGTATCTTTGATGCTATTCTTCGTGGACATGTTGATTTCGCATCGGATCCTTGGCCTTCCATATCGAGTAGTGCCAAAGATCTGGTCAAGAAGATGTTACGAGCTAACCCCAAAGAAAGGCTCTCAGCAGTTGAAGTCCTTAATCATCCTTGGATGAGAGAAGATGGAGCATCTGATAAGCCTCTAGATATTGCTGTTTTAACCAGAATGAAACAATTCAGGGCAATGAACAAGTTAAAGAAAGTAGCTCTGAAGGTTATTGCTGAAAACCTTTCTGAAGAAGAAATCATTGGCTTGAAGGAAATGTTTAAATCCATGGACACAGATAACAGTGGAACAATTACTTTTGAAGAGTTGAAAGCTGGTCTGCCAAAACTGGGTACTAAGCTTTCCGAGTCTGAAGTAAGGCAGTTGATGGAAGCGGCTGACGTAGACGGAAATGGGACCATTGATTACATTGAATTTATAACAGCTACCATGCACATGAATAGAATGGAAAGAGAGGACCACCTATATAAAGCTTTTGAATATTTTGACAAGGATAGAAGCGGTTATATCACAATTGAAGAGTTGGAATCTGCCCTTAAAAAATATAACATGGGTGATGAGAAAGCAATAAAGGAAATCATTGCGGAAGTCGATACAGACAATGATGGAAGAATTAACTATGACGAGTTTGTAGCCATGATGAGGAAAGGCAATCCAGATTTAGTAACCAACAGACATCGCAAATAA 1533 0.4971 MGNCNSEASSQTETDRHSDHHHHPQPSNSNSNGITVLPPNSKPSVGRVLGRPMEDVRSTYTFGRELGRGQFGVTYLATHKHTKQQFACKSIATRKLVHRDDLEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMELCAGGELFDRIIAKGHYSERAAADLCRQIVTVVHDCHTMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRSYGPEADIWSAGVILFILLCGVPPFWAEKEQRIFDAILRGHVDFASDPWPSISSSAKDLVKKMLRANPKERLSAVEVLNHPWMREDGASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDKDRSGYITIEELESALKKYNMGDEKAIKEIIAEVDTDNDGRINYDEFVAMMRKGNPDLVTNRHRK 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02370 510 ProSitePatterns EF-hand calcium-binding domain. 445 457 IPR018247 -
Pumo8g02370 510 SMART efh_1 471 499 IPR002048 GO:0005509
Pumo8g02370 510 SMART efh_1 364 392 IPR002048 GO:0005509
Pumo8g02370 510 SMART efh_1 436 464 IPR002048 GO:0005509
Pumo8g02370 510 SMART efh_1 400 428 IPR002048 GO:0005509
Pumo8g02370 510 PANTHER SERINE/THREONINE-PROTEIN KINASE 55 492 - -
Pumo8g02370 510 SUPERFAMILY EF-hand 356 497 IPR011992 -
Pumo8g02370 510 SMART serkin_6 60 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02370 510 MobiDBLite consensus disorder prediction 1 51 - -
Pumo8g02370 510 ProSitePatterns EF-hand calcium-binding domain. 409 421 IPR018247 -
Pumo8g02370 510 CDD STKc_CAMK 60 317 - -
Pumo8g02370 510 ProSiteProfiles Protein kinase domain profile. 60 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02370 510 MobiDBLite consensus disorder prediction 25 39 - -
Pumo8g02370 510 ProSitePatterns Protein kinases ATP-binding region signature. 66 89 IPR017441 GO:0005524
Pumo8g02370 510 Pfam Protein kinase domain 60 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02370 510 FunFam calcium-dependent protein kinase 1 146 325 - -
Pumo8g02370 510 Gene3D - 326 500 - -
Pumo8g02370 510 SUPERFAMILY Protein kinase-like (PK-like) 57 328 IPR011009 -
Pumo8g02370 510 ProSitePatterns EF-hand calcium-binding domain. 373 385 IPR018247 -
Pumo8g02370 510 ProSiteProfiles EF-hand calcium-binding domain profile. 468 502 IPR002048 GO:0005509
Pumo8g02370 510 ProSiteProfiles EF-hand calcium-binding domain profile. 432 467 IPR002048 GO:0005509
Pumo8g02370 510 FunFam Calcium-dependent protein kinase 1 325 500 - -
Pumo8g02370 510 FunFam Calcium-dependent protein kinase 1 62 145 - -
Pumo8g02370 510 ProSiteProfiles EF-hand calcium-binding domain profile. 396 431 IPR002048 GO:0005509
Pumo8g02370 510 Pfam EF-hand domain pair 365 425 IPR002048 GO:0005509
Pumo8g02370 510 Pfam EF-hand domain pair 435 497 IPR002048 GO:0005509
Pumo8g02370 510 ProSitePatterns EF-hand calcium-binding domain. 480 492 IPR018247 -
Pumo8g02370 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Pumo8g02370 510 Gene3D Phosphorylase Kinase; domain 1 62 145 - -
Pumo8g02370 510 ProSiteProfiles EF-hand calcium-binding domain profile. 360 395 IPR002048 GO:0005509
Pumo8g02370 510 Gene3D Transferase(Phosphotransferase) domain 1 146 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02370 Pumo-Chr8 60899259 60904797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02370 46 509 EF-hand Containing Proteins AT4G23650 81.935 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pumo8g02370 Pkinase 2.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02370 K13412 - gmx:100808536 956.822