Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02355 ATGGATTGGGATTTGCAAGCTATTGGTGGGATGCACCAAAGCCCCAGCCACCATCGTGGACAAGGACAACCCGCATGTCATTTTTTCTCAACAACATTTCTGTTTGAACAAGGAGACCTACTTTGCAATTTTCAGGAATTCTCAGAAACCACAACAGTGGTTGATGAATTAGAAGACTTTACAAAACCTTTCTACCCCCATAACCCTCTTCCCATCGTTTCAAATTACTCCCCACCTATACCGATGATAAAACTGAAGAAGTCAAACAAGAAGAATAAGAGGGTGGTGAAGCATGTGACAGCAGCAGATCATGGTGTTTCGGACCCATGGGCATGGCGTAAATATGGGCAGAAACCAATAAAGGGATCACCCTATCCTCGTAGCTATTATAGATGCAGCAGCTCCAAAGGATGTTTGGCTAGGAAACACGTGGAACGGAGCCATTTGGATCCTGGGGTTTTCATAGTTACCTACACTGCAGAACACAGCGATCCTCCACCCTACACGCAAAAACTCACAACCACGCAAGAACAGTTCCACAATTGCACCTCCAAGACTCATGATGATGATCAACAGACTTCACGCCTGTGGTGGCAGAGGCTATCGAACAAAGGAGTAAGGAGCTTAAGGAAAAGAGGAAGCTTTTGTAGAAGGTGA 657 0.4536 MDWDLQAIGGMHQSPSHHRGQGQPACHFFSTTFLFEQGDLLCNFQEFSETTTVVDELEDFTKPFYPHNPLPIVSNYSPPIPMIKLKKSNKKNKRVVKHVTAADHGVSDPWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKHVERSHLDPGVFIVTYTAEHSDPPPYTQKLTTTQEQFHNCTSKTHDDDQQTSRLWWQRLSNKGVRSLRKRGSFCRR 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02355 218 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 81 186 IPR044810 GO:0003700
Pumo8g02355 218 SMART WRKY_cls 106 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo8g02355 218 Pfam WRKY DNA -binding domain 108 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo8g02355 218 SUPERFAMILY WRKY DNA-binding domain 105 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo8g02355 218 FunFam WRKY transcription factor 22 87 160 - -
Pumo8g02355 218 Gene3D WRKY domain 88 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo8g02355 218 ProSiteProfiles WRKY domain profile. 101 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02355 Pumo-Chr8 60795425 60796248 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02355 86 167 WRKY Transcription Factor Family AT5G52830 69.512 1.81e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo8g02355 WRKY 1.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02355 K13426 - gmx:102667019 204.142