Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02346 ATGTTTCAAATTTTGGACAAGTGGATTGGCTTAACCAATCATGGGAAGCGGCAAAGGCATAGTGTGGTAGCAGAGCTTCTAACAGTAGCCGGCTGCACCGTAGCAACCATGATCATTCCCGAGAAGAACCGTAGAGAGATCTGCAAATACCTCTTTCAAGAGGGAGTTTGCTATGCGAAGAAGGACTTCAATCTGGCGAAGCACCCTGAGATTGATGTGCCGAATCTGCAGGTGATAAAGCTGATGCAGAGCTTCAAGTCAAGAGAGTACGTGAGGGAGACATTTGCGTGGATGCACTATTACTGGTTCCTCACCAACGATGGAATTGAGTTCCTCAGGACCTACCTCAACCTTCCCTCCGAAATCGTCCCAGCCACTCTCAAGAAGCAGGCCAAGCCCGCTGGAAGACCATTCGGTGGCCCACCCGGTGATCGTCCTAGGGGCCCACCTCGCTTTGACGGAGAGAGGAGATTCGGTGGTGACCGTGATGGATACCGTGGAGGTCCCCGGGGACCTGGTGGTGATTTCGGTGACAAAGGTGGAGCTCCTGCTGACTACAGACCTTCTTTTGGGGGTCCTGGCGGAAGGCCTGGCTTCGGTCGTGGTGCTGGTGGTTATGGAGCACCAACTAGTTCAAACATTCCTTAA 648 0.5278 MFQILDKWIGLTNHGKRQRHSVVAELLTVAGCTVATMIIPEKNRREICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFDGERRFGGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGAGGYGAPTSSNIP 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02346 215 PANTHER 40S RIBOSOMAL PROTEIN S10 37 209 IPR037447 -
Pumo8g02346 215 FunFam 40S ribosomal protein S10 37 140 - -
Pumo8g02346 215 Pfam Plectin/S10 domain 39 130 IPR005326 -
Pumo8g02346 215 MobiDBLite consensus disorder prediction 148 164 - -
Pumo8g02346 215 Gene3D - 37 140 IPR036388 -
Pumo8g02346 215 MobiDBLite consensus disorder prediction 127 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02346 Pumo-Chr8 60690203 60692597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02346 37 215 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 74.860 2.75e-76 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02346 K02947 K09422 gmx:100797787 243.432