Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02345 ATGAGTAGCAAAGGCAAAGAGCAAGATTCAATTAAGAAGGTTATGACTCACGGAGGTCGATACGTGCAATACAATGTGTACGGAAACTTGTTCGAGGTCTCCTCCAAGTATGTCCCTCCGATTCGCCCTATCGGTAGAGGCGCATACGGCATCGTTTGTGCTGCTGTTAATTGCGATACACACGAAGAAGTTGCCATAAAGAAGATTGGTAACGCATTTGACAACATCATTGACGCTAAACGGACTCTGAGGGAAATTAAGCTCCTTCGCCACATGGACCATGAAAACATAATTGCTATTAGGGATATCATACGACCTCCCAGAAAGGATGCCTTCAATGATGTTTACATTGTTTATGAATTGATGGACACTGATCTTCATCAGATTATTCGTTCTGACCAACCTCTTAACGGTGACCACTGTCAGTACTTTTTATATCAGCTGTTACGGGGGCTGAAATATGTGCATTCTGCTAATATCTTGCACCGTGATCTTAAGCCCAGTAATTTGCTTCTCAATGCCAACTGTGATCTTAAAATTGCGGACTTTGGTCTGGCAAGGACAACATCTGAAACGGATTTCATGACGGAGTATGTTGTCACCCGATGGTACCGAGCCCCGGAATTGCTTCTTAATTGTTCAGAGTACACCTCTGCAATTGATGTTTGGTCTGTTGGTTGCATATTTGGTGAAATTATGACCAGAGAACCCTTGTTTCCTGGGAAAGATTATGTTCATCAACTAAGGCTTATAACTGAGTTAATAGGTTCACCTGATGATGCCAGCCTTGGATTTCTCCGAAGTGAAAATGCCAAAAGATATGTTCAACAGCTTCCACAATATAGGAAGCAAAATTTCTCCGCTAGATTCCCAAATATGTCTCCTGAGGCATTGGATCTACTAGAAAAGATGCTTATCTTTGATCCCAACAAACGCATTACAGTTGATGAAGCACTATGTCATCCATATCTTTCATCACTTCATGACATCAATGATGAACCAGTTGGTCCTGGGCAATTCAATTTTGATTTTGAGCAGCCAACATGCACCGAAGAGCACATCAAGGAGCTCATCTGGAGGGAATCAGTGAAGTACAATCCAGAGAGAGATAGGAAGAAGGGAGAGATAAGTGATTGA 1137 0.4213 MSSKGKEQDSIKKVMTHGGRYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNCDTHEEVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHENIIAIRDIIRPPRKDAFNDVYIVYELMDTDLHQIIRSDQPLNGDHCQYFLYQLLRGLKYVHSANILHRDLKPSNLLLNANCDLKIADFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSENAKRYVQQLPQYRKQNFSARFPNMSPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHDINDEPVGPGQFNFDFEQPTCTEEHIKELIWRESVKYNPERDRKKGEISD 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02345 378 FunFam Mitogen-activated protein kinase 122 351 - -
Pumo8g02345 378 ProSitePatterns Protein kinases ATP-binding region signature. 44 68 IPR017441 GO:0005524
Pumo8g02345 378 ProSitePatterns MAP kinase signature. 73 176 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pumo8g02345 378 CDD STKc_TEY_MAPK 31 367 - -
Pumo8g02345 378 FunFam Mitogen-activated protein kinase 23 132 - -
Pumo8g02345 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Pumo8g02345 378 Gene3D Transferase(Phosphotransferase) domain 1 122 351 - -
Pumo8g02345 378 Pfam Protein kinase domain 42 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02345 378 Gene3D Phosphorylase Kinase; domain 1 21 361 - -
Pumo8g02345 378 SMART serkin_6 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02345 378 ProSiteProfiles Protein kinase domain profile. 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02345 378 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 36 325 - -
Pumo8g02345 378 SUPERFAMILY Protein kinase-like (PK-like) 41 332 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02345 Pumo-Chr8 60685557 60688289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02345 7 368 MAP Kinase Gene Family AT4G01370 83.425 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pumo8g02345 Pkinase 1.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02345 - - gmx:100803024 722.62