LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo8g02330	ATGCCATCATGGTGGGAAAAGTCTTCATCCAAAGTGGTAAAGAGGAAAGAAAAAAGGAAAAGTATTATTGATACAATACAAAGGAAATTAAATAAATCAAGAGGGTCTACGAGACATCATAGTCACACTATCTCAGAGAAGGGAACCAGATCCCTTGTGCCTACAAGATCACCATCACCCTCAACACATGTCTCCTGCCAACAAAGTTTCGCAGAAAGGCCTCTTGCTCAGCCACTCCCACTCCCAGGGACGCACCGTCCCTTCACCAATCATGCAAATTCTGGAACTAGTGTAACATCAAAACCAGAAAGCACCAGGGGCTCAAAGTCATCTCTATATTTCCCATTACCAAAACCTGGTTGTGTTTTTAACAGGGGAGAACCTACGGATGCTGAGGAAGATATTGCCACTGCATCAGTTTCTAGTGGTAGCTCTATTGATAGTGATGACCAATGTGACTCACATTTCCTTAGTCCTCTGGCATCTGACTCTGAAAATGGAAACCGAGCTACTATTCACAGTACCGTCAGTGTGGTTCACAAGGATCAGCCACCCATTACTATCCAAAAAAACTCAAGAGTATCCTCAAAACCGGCTCCTCAACTGTGCAATCATCAACTTTTATCTAACACACCCAAAGGGGTTTCTTTGCGTCTGCCAAATCCGCAAATAGCTTGTTCAGGTGGTTTATGGAGTGCTCCTGACAGTTCAATGTCAAGTCCTTCTAGAAGTCCACTGAGAACATTTGGTTCCGAGCAAGTTTTGAACTCTGGATTCTGTACAGGAAAGCCATATCCAGATCTAGCTTCAGGGCACTGCTCTAGTCCAGGTTCAGGCCATAATTCTGGGCATAATTCAGTTGGAGGGGATCTGACAGGGCAGATATTCTGGCCACAGAGCAGGTGTAGCCCTGAGTGTTCTCCGATACCCAGTCCTGGAATGAAAAGTCCTGGTTTCAGTTCCAGGATACACAGTGGTGCTGTCACCCCTCTTCATCCACGTGCTGGAGGTGCTACATCAGAATCACCCACAAGACGCCCTGATGATGTGAAACAACGGACTCACCGATTACCTCTTCCTCCAATAACAATCCCTAATCATTGTCCATTTTCTCCAACATATTCTGCAACTACTACTCCTTCAGCACCTCGTAGTCCCGGCATAGCAGAAAATCTAACAAGCCCTGGCTCACGCTGGAAAAAGGGGCAGCTGCTTGGAAGGGGGACATTTGGGCATGTATATCTTGGTTTTAACAGTGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAACTCTTTTTTCAGATGATGCTAAATCAAGGGAGAGTGCTCAACAACTTGGTCAAGAAATTTCATTGCTAAGTCACCTGCGACATCCAAATATAGTCCAATATTATGGATCTGAGACGGTAGATGACAAACTTTATATATACTTGGAGTATGTCTCTGGTGGGTCAATCTATAAGTTGCTTCAACAATATGGCCAGCTTGGTGAAATTGTTATTCGCAATTATACTCGACAAATTCTGTTAGGTCTTGCTTATTTACATGCTAAAAACACTGTTCATAGAGACATTAAAGCAGCAAACATATTGGTGGATCCTAATGGGAGGGTAAAATTGGCAGACTTTGGTATGGCAAAGCATATAAGTGGGCAATCCTGTCCATTATCTTTCAAAGGAAGTCCTTACTGGATGGCACCTGAGGTGATAAAAAATTCAAATGGTTGTAATCTTGCTGTTGATATATGGAGCCTTGGCTGCACTGTTTTCGAGATGGCTACAACAAAACCTCCTTGGAGCCAATATGAAGGGGTTGCGGCTATGTTTAAGATTGGAAACAGCAAGGAACTTCCTGCAATGCCAGATCATCTATCAGAAGACGGAAAAGATTTTATCAGGCAATGCTTGCAAAGGAATCCACTGCAACGTCCCTCTGCTGCTCAACTTCTGCTGCATCCATTTGTTAAAAAAGCCACACTGGAAAGACCTATTCTGTCCGCTGATCCTTCAGAAGCAAAACCTGATTTTGTAAATGCTATGAGATCTCTGGCCATTGGACCTGCAAAACATAATTTAGGCTTAGTTTCAGAAGCAGCTGGTACATATCTGTCTAGAAGCTTGAGAACTGGCTCAGGATCAAGTGATGCCCATACACCAAGGAACATTTCATGTCCCGTGTCTCCTCCTACTGGGAGCCCACTTTTGCCTCCTAGGTTACTGCATGTGAGTGGAAGGCTGTCTCCATCTCCCATATCTAGTCCCCATACTGCATCTGGCTCATCTACACCACTCAGTGGTGGCATTGGTGCAGTCCCTTTTCATCATACAAAGCAGCCAATATTCTCACATGAAGGTATCAGTGTGATACAAAGACCTCAAAATGCTCGTAATCAGGAACCAATGCATGACCCAATTTGGGGGATTCTGAAAAGCACTTTTGCTTGCCCGGATATAGTTTCATCCAATAATGATGCTCTTGGAAACCATAATAATAGGAGGGTTGTCCAGGGACTCCCTAGAGATATTTAG	2529	0.4405	MPSWWEKSSSKVVKRKEKRKSIIDTIQRKLNKSRGSTRHHSHTISEKGTRSLVPTRSPSPSTHVSCQQSFAERPLAQPLPLPGTHRPFTNHANSGTSVTSKPESTRGSKSSLYFPLPKPGCVFNRGEPTDAEEDIATASVSSGSSIDSDDQCDSHFLSPLASDSENGNRATIHSTVSVVHKDQPPITIQKNSRVSSKPAPQLCNHQLLSNTPKGVSLRLPNPQIACSGGLWSAPDSSMSSPSRSPLRTFGSEQVLNSGFCTGKPYPDLASGHCSSPGSGHNSGHNSVGGDLTGQIFWPQSRCSPECSPIPSPGMKSPGFSSRIHSGAVTPLHPRAGGATSESPTRRPDDVKQRTHRLPLPPITIPNHCPFSPTYSATTTPSAPRSPGIAENLTSPGSRWKKGQLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSRESAQQLGQEISLLSHLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIYKLLQQYGQLGEIVIRNYTRQILLGLAYLHAKNTVHRDIKAANILVDPNGRVKLADFGMAKHISGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVFEMATTKPPWSQYEGVAAMFKIGNSKELPAMPDHLSEDGKDFIRQCLQRNPLQRPSAAQLLLHPFVKKATLERPILSADPSEAKPDFVNAMRSLAIGPAKHNLGLVSEAAGTYLSRSLRTGSGSSDAHTPRNISCPVSPPTGSPLLPPRLLHVSGRLSPSPISSPHTASGSSTPLSGGIGAVPFHHTKQPIFSHEGISVIQRPQNARNQEPMHDPIWGILKSTFACPDIVSSNNDALGNHNNRRVVQGLPRDI	842

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo8g02330	842	MobiDBLite	consensus disorder prediction	706	765	-	-
	Pumo8g02330	842	Pfam	Protein kinase domain	400	655	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo8g02330	842	MobiDBLite	consensus disorder prediction	9	27	-	-
	Pumo8g02330	842	SUPERFAMILY	Protein kinase-like (PK-like)	397	739	IPR011009	-
	Pumo8g02330	842	ProSitePatterns	Protein kinases ATP-binding region signature.	405	428	IPR017441	GO:0005524
	Pumo8g02330	842	Gene3D	Transferase(Phosphotransferase) domain 1	397	680	-	-
	Pumo8g02330	842	CDD	STKc_MEKK1_plant	398	655	-	-
	Pumo8g02330	842	MobiDBLite	consensus disorder prediction	368	396	-	-
	Pumo8g02330	842	MobiDBLite	consensus disorder prediction	135	168	-	-
	Pumo8g02330	842	SMART	serkin_6	399	655	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo8g02330	842	MobiDBLite	consensus disorder prediction	746	765	-	-
	Pumo8g02330	842	PANTHER	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	67	661	-	-
	Pumo8g02330	842	MobiDBLite	consensus disorder prediction	706	728	-	-
	Pumo8g02330	842	MobiDBLite	consensus disorder prediction	47	72	-	-
	Pumo8g02330	842	MobiDBLite	consensus disorder prediction	87	111	-	-
	Pumo8g02330	842	MobiDBLite	consensus disorder prediction	325	396	-	-
	Pumo8g02330	842	ProSiteProfiles	Protein kinase domain profile.	399	655	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo8g02330	842	FunFam	Mitogen-activated protein kinase kinase kinase	397	679	-	-
	Pumo8g02330	842	MobiDBLite	consensus disorder prediction	1	168	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo8g02330	Pumo-Chr8	60522568	60530373	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo8g02330	1	784	MAP Kinase Kinase Kinase	AT1G63700	63.151	0.0	880

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Pumo8g02330		Pkinase	3.6e-72	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo8g02330	K20717		-	gmx:100777350	1484.54