Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02312 ATGGTGGGCTCTCTCTTTCTGGTTGCAGTTCTTGCTGCTTTTCAGAGATGTAACAAAAAATCATCTATCATTATTCCTTGGAAAAAATCTGGAAGCCAGAAAGATCATCCGGCAGTATATATAGACCCTGAGATGTTGAAGGATGTGAGAAGGTATAGCAGACAAGAGCTTGAAGTTGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGATAGTGTGGTCTACAAGGGAACAATGAAAGGTGGGCCTGAGATTGCGGTGATTTCCCTCTGCATCAAGGAGGAGCAATGGACAGGATATCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTAAATCATGAGAATATAGGAAAACTATTGGGCTATTGTAGAGAAGACACTCCATTTACAAGGATGTTGGTTTTTGATTATGCTTCAAATGGGACACTTCATGATCACCTACATTGTTATGAAGAAGGATGTCAATTCTCTTGGACACGGCGTATGAAGATTGCCATAGGCATTGCACGTGGACTCAAGTATTTGCATACAGAAGTGGAGCCTCCATTTACTATCTCAGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTCCCCTAAGTTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAAAAGAATTCTGGTTCCATTGGCAGCCAAGGTGCTATCTGTGTTCTTCCAAATTCCCTTGAAGCACGCCATCTTGATACCAAAGGAAACATATTTGCTTTTGGGGTACTTCTACTAGAGATAATCAGCGGGAGACCTCCATACTGTAAGGACAAAGGGTACTTGGTGGACTGGGCCAAGGACTACCTTGAAATGCCAGATGAAATGTCATTTGTGGTGGATCCCGAATTGAAAAATTTTAGATATGAAGACCTCAAAGTGATATGCGAGGTAATAACTCTTTGTATCAACACTGATACAACTGTGTGTCCATCTATGCGAGAATTATGTAGCATGCTGGAGAGCAGAATTGACACATCAGTAAGCGTGGAGCTCAAGTCTTCATCTTTGGCTTGGGCTGAACTTGCACTTTTATCTTAA 1086 0.4162 MVGSLFLVAVLAAFQRCNKKSSIIIPWKKSGSQKDHPAVYIDPEMLKDVRRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEQWTGYLELYFQREVADLARLNHENIGKLLGYCREDTPFTRMLVFDYASNGTLHDHLHCYEEGCQFSWTRRMKIAIGIARGLKYLHTEVEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSIGSQGAICVLPNSLEARHLDTKGNIFAFGVLLLEIISGRPPYCKDKGYLVDWAKDYLEMPDEMSFVVDPELKNFRYEDLKVICEVITLCINTDTTVCPSMRELCSMLESRIDTSVSVELKSSSLAWAELALLS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02312 361 ProSiteProfiles Protein kinase domain profile. 62 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02312 361 PANTHER PROTEIN MALE DISCOVERER 2 2 361 - -
Pumo8g02312 361 Gene3D Phosphorylase Kinase; domain 1 37 143 - -
Pumo8g02312 361 Pfam Protein tyrosine and serine/threonine kinase 65 331 IPR001245 GO:0004672|GO:0006468
Pumo8g02312 361 FunFam Inactive receptor-like serine/threonine-protein kinase 37 143 - -
Pumo8g02312 361 PIRSF ILK 10 350 - -
Pumo8g02312 361 SUPERFAMILY Protein kinase-like (PK-like) 40 336 IPR011009 -
Pumo8g02312 361 Gene3D Transferase(Phosphotransferase) domain 1 144 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02312 Pumo-Chr8 60360770 60362419 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02312 4 336 Receptor kinase-like Gene Family AT3G59420 31.461 2.18e-38 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pumo8g02312 PK_Tyr_Ser-Thr 1.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02312 - - gmx:100794714 684.1