Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02304 ATGCACTATGGTTCGAGATCATGTCATCAAGCTAAACATATCAGGATCATCATTAAAGGGGTTTCTTGCACCAGAGCTGGGGCAAATCACCTACTTGCAAGAACTGTATGTTCATCCTTTCTCCTAGCCATACTTCATCCTAAAAAAATTTTGCATGGCAACAATTTCATTGGAACGATACCTAGAGAGTTGGGTGTTTTGAAATCTCTCAAGGATTTGGATTTGGGAATGAATCAGTTAACGGGACCAATTCCTCCAGAGATTGGAAATCTAACCCAAGTTGTGAAAATAAACTTGCAGTCCAATGGGTTGACTGGTAGGCTACCTCCAGAGCTTGGAAACTTGAGATACCTTCAAGAACTTCGGGTGGATAGGAATAGGCTTCAAGGACCTGTTCCTGCTGGTGGTAGCTCAAATTTTGCTTCAAATATGCATGGGATGTATGCATCAAAGGAGAATGTAACTGGCTTCTGTCGTTCATCTCAGTTGAAAGTAGCAGACTTCTCATTTAATTTTTTAGTTGGTAGCATACCCAAATGCTTGGAGTATCTTCCAAGGTTAAGCTTTCAAGGGAATTGCCTCCAGGGCCAGGATTTAAAGCAGCGGTCTTCTATACAGTGTGCGGGTGCTTCACCTGCCAGTGCCAAGAGCCAGCCAGTGGTGAATCCAAGCCACCAACCTGCTGAATATGTGTCCAAGCATCACGGAGCATCGAAACCTGTTTGGCTCTTGGCTCTAGAAATAGTAACTGGAACTATGGTGGGCTCTCTCTTTCTGGTTGCAGTTCTTGCTGCTTTTCAGAGATGTAACAAAAAATCATCTATCATTATTCCTTGGAAAAAATCTGGAAGCCAGAAAGATCATCCGGCAGTATATATAGACCCTGAGATGTTGAAGGATGTGAGAAGGTATAGCAGACAAGAGCTTGAAGTTGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGATAGTGTGGTCTACAAGGGAACAATGAAAGGTGGGCCTGAGATTGCGGTGATTTCCCTCTGCATCAAGGAGGAGCAATGGACAGGATATCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTAAATCATGAGAATATAGGAAAACTATTGGGCTATTGTAGAGAAGACACTCCATTTACAAGGATGTTGGTTTTTGATTATGCTTCAAATGGGACACTTCATGATCACCTACATTGTTATGAAGAAGGATGTCAATTCTCTTGGACACGGCGTATGAAGATTGCCATAGGCATTGCACGTGGACTCAAGTATTTGCATACAGAAGTGGAGCCTCCATTTACTATCTCAGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTCCCCTAAGTTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAAAAGAATTCTGGTTCCATTGGCAGCCAAGGTGCTATCTGTGTTCTTCCAAATTCCCTTGAAGCACGCCATCTTGATACCAAAGGAAACATATTTGCTTTTGGGGTACTTCTACTAGAGATAATCAGCGGGAGACCTCCATACTGTAAGGACAAAGGGTACTTGGTGGACTGGGCCAAGGACTACCTTGAAATGCCAGATGAAATGTCATTTGTGGTGGATCCCGAATTGAAAAATTTTAGATATGAAGACCTCAAAGTGATATGCGAGGTAATAACTCTTTGTATCAACACTGATACAACTGTGTGTCCATCTATGCGAGAATTATGTAGCATGCTGGAGAGCAGAATTGACACATCAGTAAGCGTGGAGCTCAAGTCTTCATCTTTGGCTTGGGCTGAACTTGCACTTTTATCTTAA 1842 0.4245 MHYGSRSCHQAKHIRIIIKGVSCTRAGANHLLARTVCSSFLLAILHPKKILHGNNFIGTIPRELGVLKSLKDLDLGMNQLTGPIPPEIGNLTQVVKINLQSNGLTGRLPPELGNLRYLQELRVDRNRLQGPVPAGGSSNFASNMHGMYASKENVTGFCRSSQLKVADFSFNFLVGSIPKCLEYLPRLSFQGNCLQGQDLKQRSSIQCAGASPASAKSQPVVNPSHQPAEYVSKHHGASKPVWLLALEIVTGTMVGSLFLVAVLAAFQRCNKKSSIIIPWKKSGSQKDHPAVYIDPEMLKDVRRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEQWTGYLELYFQREVADLARLNHENIGKLLGYCREDTPFTRMLVFDYASNGTLHDHLHCYEEGCQFSWTRRMKIAIGIARGLKYLHTEVEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSIGSQGAICVLPNSLEARHLDTKGNIFAFGVLLLEIISGRPPYCKDKGYLVDWAKDYLEMPDEMSFVVDPELKNFRYEDLKVICEVITLCINTDTTVCPSMRELCSMLESRIDTSVSVELKSSSLAWAELALLS 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02304 613 ProSiteProfiles Protein kinase domain profile. 314 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02304 613 FunFam Leucine-rich repeat receptor protein kinase EMS1 47 138 - -
Pumo8g02304 613 Gene3D Transferase(Phosphotransferase) domain 1 396 603 - -
Pumo8g02304 613 Gene3D Ribonuclease Inhibitor 38 206 IPR032675 -
Pumo8g02304 613 PANTHER PROTEIN MALE DISCOVERER 2 20 613 - -
Pumo8g02304 613 Gene3D Phosphorylase Kinase; domain 1 289 395 - -
Pumo8g02304 613 FunFam Inactive receptor-like serine/threonine-protein kinase 289 395 - -
Pumo8g02304 613 SUPERFAMILY L domain-like 51 188 - -
Pumo8g02304 613 SUPERFAMILY Protein kinase-like (PK-like) 292 588 IPR011009 -
Pumo8g02304 613 Pfam Protein tyrosine and serine/threonine kinase 318 533 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02304 Pumo-Chr8 60291710 60296843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02304 78 592 Receptor kinase-like Gene Family AT5G45780 30.114 1.35e-51 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pumo8g02304 PK_Tyr_Ser-Thr 6.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02304 - - gmx:100794714 1080.09