Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02303 ATGACGAGGGAAACGATACAACACGCCGTCACTCTTTCACTTCTCAGCAATGGCCTCAAAGTTACAAAGACCACAGATTCTTACACACTTGCTGCAACTCCAAATTTTGAATCAATTCTACGAGTACCAAGCATTATATATTCCAGTTTTGAAAATCGTTCAAAGAATAACTTAGACATAGATGGAAAGACTCCTTTTCTCTCTGATCACGAAGGAATTACCCAATCAACATTGAGGAAGAAAGGTTCAGTGCAAAAACATTTATCTGGTGAATTGCCCATTGGCCATGGATGCAGCTTCATTCAAACAGTTTTTAATGCGACTAATGTGATGGCTGGAGTTGGCATTTTGTCTACACCTTATACATTGAAAGAAGCTGGCTGGATGAGCATGGTGTTGATGGTTCTTTTTGCAGTCGTTTGTTGCTATACAGCCACCCTTATGAGATACTGCTTTGAAAGTAGAGAAGGAATCACTAGCTACCCAGATATAGGGGAAGCTGCATTTGGAAAATATGGTCGTATTATTGTATCGATCATATTGTACACTGAATTATATTCATGTTGTGTGGAATTCATCACCTTGGAAGGAGATAACCTCACTGGGCTATTTCCGGGAACATCCTTAGACTTGGGTAGTTTCCAGTTAGACTCTGTGCACTTGTTTGGAATTTTGGCTGCACTTATTATTATCCCCACTGTTTGGCTAAAGGATCTTCGTATAATCTCTATTCTGTCAGCTGGAGGGGTTTTTGCAACATTGTTGATTGTTATCTGTGTGTTTTATGTTGGGACAATAGGCGGTGTTGGATTCCATCCCACTGGTCAATTGGTCAATTGGAGTGGCATTCCATTAGCTATTGGTATCCATGGGTTTTGCTTTGCAGGACATTCAGTTTTTCCAAATATTTACCAATCTATGGCTGACAAAACACAATTTACTAAAGCACTAATAATATGTTTTGTAGTGTCTATTACAATATATGGAGGTGTTGCAATCATGGGATTTCTCATGTTTGGTGATGGGACTTTGTCTCAAATAACATTAAATATGCCACGAGGTGCTGTTGCTTCCAAGGTTGCATTGTGGACAACAGTGAGTATGAGAACAGCACTTGTTGTATCTACGGTTTGTGCTGCTTTTCTGATTCCTTTTTTTGGGTATGTGATGGCTTTAATTGGCTCTCTCTTCAGTATACTTGTGCTACTGCGGCCAAACCTCCTTCATCCGCGACGATGTCTCCAGCGAGTTAATTTGCTGCTCGTGCGTTCTAATTTGACGCCCAAATTGGCATTGCGGGTTCCGGCACCGCGCAAAACTCCACCGACGAAGACATGCCACAACCTAATCGTCTTCGATTTGGCAAGACCTCACCCTCGAAGGAGATGA 1389 0.414 MTRETIQHAVTLSLLSNGLKVTKTTDSYTLAATPNFESILRVPSIIYSSFENRSKNNLDIDGKTPFLSDHEGITQSTLRKKGSVQKHLSGELPIGHGCSFIQTVFNATNVMAGVGILSTPYTLKEAGWMSMVLMVLFAVVCCYTATLMRYCFESREGITSYPDIGEAAFGKYGRIIVSIILYTELYSCCVEFITLEGDNLTGLFPGTSLDLGSFQLDSVHLFGILAALIIIPTVWLKDLRIISILSAGGVFATLLIVICVFYVGTIGGVGFHPTGQLVNWSGIPLAIGIHGFCFAGHSVFPNIYQSMADKTQFTKALIICFVVSITIYGGVAIMGFLMFGDGTLSQITLNMPRGAVASKVALWTTVSMRTALVVSTVCAAFLIPFFGYVMALIGSLFSILVLLRPNLLHPRRCLQRVNLLLVRSNLTPKLALRVPAPRKTPPTKTCHNLIVFDLARPHPRRR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02303 462 PANTHER OS05G0424000 PROTEIN-RELATED 103 366 - -
Pumo8g02303 462 Pfam Transmembrane amino acid transporter protein 97 355 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02303 Pumo-Chr8 60263918 60270593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02303 23 387 Amino Acid or Auxin Permease AAAP Family AT2G41190 62.069 2.15e-173 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02303 K15015 - gmx:100816368 687.182