Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02286 ATGGGTAAGGCATCTAAATGGTTTCGCGGCCTTCTCGGTCTCAAAAGACCAGATTCCCCCTCTCCCAAACCACCCAAGGACAAACGCCGCTGGACCTTCGTCAAGTCTTACAGAGAAAAGGGAGACCATTCCTCCGGACACGTCCAAGCCGCCCATCCCGACATCGCTGCCACCACCACCGGAGGCATTTCTCCAGAACAATGGGCAGCCATTAAGATTCAAGCCGCCTTCCGAGGCTCTTTGGCAAGGAAAGCCCTTCGAGCGTTAAAAGGATTGGTGAAACTGCAGGCATTAGTGAGAGGTCACATTGAAAGGAAGCGCACAGCAGAGTGGCTGCAAAGGGTGCAAGCACTCTTACGTGTACAGGCCCAAATCCGTGCTGGGCGGGCCCAAATTTGGAATGCAAAGTCATCCACTGCCCACCTCCATGGTCCAGCAACACCAGACAAATTTGAAAGCCCCATCAGATCCGAGAGCATGAAATATGATCAGTCATCATCAGTACTCAAGAGAAACAGCTCCAAATCCCGTATGCAGATGAATGGCAATCAAGAGAAATGTAGGAATAGATCAGATAGTCACGCTGATGAACAACCATGGAATCAACGAAGATCATGGACAAGAGCTAGTAGCATGGATGAAGAAAGAAGTCTCAGGATTCTAGAAATTGATTCTGTAAAACCACACATAACATCAAAACGTAGAAACCTCTTTTACTCCCCTAGCCAACCTTTGGTTTCGGATCAATCGGGTCAAAGTCCATCTTCTTATGAAGTTCTTCAGTCTTATTACAGCCATGAGGAGGGCTCATTCTTCTGTGCTGCTGACATTAATAGTCCTCAAGCTTTATCTGCCTCTTCTAAAGACGGTGCCTCCAAAAGAAGCCCTTTAACTCCTACAAGGAGTGATGGCTCAAGAAGCCACCTAAGTGGTTATTCTGAACCAGCTGAGTATCCAAGTTACATGGCTTACACTGAGTCTTCAAAGGCAAAGTTAAGATCTCTGAGTGTTCCAAAGCAGAGGTCTAGTTCATCAAACAGGTACTCGCTTCATGGATTTGGTGGTGACTCAAAATTGGCCACGCAAAGGATAGCTGCATTACACGCAAGCTTCACTAACAAAGCTTACCCTGGTTCTGGTCGTTTGGACAAGCTTGGGTTGCCTGTGGCCTATAAATACTGA 1182 0.4729 MGKASKWFRGLLGLKRPDSPSPKPPKDKRRWTFVKSYREKGDHSSGHVQAAHPDIAATTTGGISPEQWAAIKIQAAFRGSLARKALRALKGLVKLQALVRGHIERKRTAEWLQRVQALLRVQAQIRAGRAQIWNAKSSTAHLHGPATPDKFESPIRSESMKYDQSSSVLKRNSSKSRMQMNGNQEKCRNRSDSHADEQPWNQRRSWTRASSMDEERSLRILEIDSVKPHITSKRRNLFYSPSQPLVSDQSGQSPSSYEVLQSYYSHEEGSFFCAADINSPQALSASSKDGASKRSPLTPTRSDGSRSHLSGYSEPAEYPSYMAYTESSKAKLRSLSVPKQRSSSSNRYSLHGFGGDSKLATQRIAALHASFTNKAYPGSGRLDKLGLPVAYKY 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02286 393 SMART iq_5 88 109 IPR000048 GO:0005515
Pumo8g02286 393 SMART iq_5 65 87 IPR000048 GO:0005515
Pumo8g02286 393 MobiDBLite consensus disorder prediction 1 59 - -
Pumo8g02286 393 Pfam IQ calmodulin-binding motif 93 107 IPR000048 GO:0005515
Pumo8g02286 393 Pfam IQ calmodulin-binding motif 68 87 IPR000048 GO:0005515
Pumo8g02286 393 MobiDBLite consensus disorder prediction 139 214 - -
Pumo8g02286 393 MobiDBLite consensus disorder prediction 20 47 - -
Pumo8g02286 393 ProSiteProfiles IQ motif profile. 90 117 IPR000048 GO:0005515
Pumo8g02286 393 Gene3D - 28 91 - -
Pumo8g02286 393 Pfam Protein of unknown function (DUF4005) 279 354 IPR025064 -
Pumo8g02286 393 PANTHER IQ-DOMAIN 5-RELATED 1 351 - -
Pumo8g02286 393 MobiDBLite consensus disorder prediction 187 201 - -
Pumo8g02286 393 MobiDBLite consensus disorder prediction 158 186 - -
Pumo8g02286 393 MobiDBLite consensus disorder prediction 283 309 - -
Pumo8g02286 393 ProSiteProfiles IQ motif profile. 66 94 IPR000048 GO:0005515
Pumo8g02286 393 MobiDBLite consensus disorder prediction 283 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02286 Pumo-Chr8 60112849 60116854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02286 1 40 IQD Protein Family AT4G23060 52.000 1.24e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02286 - - gmx:100814244 531.561