Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02285 ATGAAGTTTTATTTCTCTCTCTTGCTAACAAGCATATTTGCTGTCAAAATGCAGCCTCAATGGATGGCCCCTGAAGTCCTTAGAAATGAACCTTCAAATGAAAAGTCTGATGTGTACAGTTTTGGTGTCATCCTCTGGGAACTAATGACTCAATCTATTCCATGGAAAAATTTGAATTCCTTACAGGTTGTTGGAGTCGTAGGCTTTATGGATAGAAGACTGGACCTTCCGGAGGGGCTTGATCCCCATGTTGCGTCAATCATCGATGATTGCTGGCGAAGTGATCCAGAGCAACGCCCATCATTTGAAGAGCTGATACAGAGAATGTTGTTCCTTGTCAACAGAGTAACAGCAGTGTCAATTAGGAGAATTTCAGAATCCTAA 384 0.4193 MKFYFSLLLTSIFAVKMQPQWMAPEVLRNEPSNEKSDVYSFGVILWELMTQSIPWKNLNSLQVVGVVGFMDRRLDLPEGLDPHVASIIDDCWRSDPEQRPSFEELIQRMLFLVNRVTAVSIRRISES 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02285 127 Gene3D Transferase(Phosphotransferase) domain 1 7 124 - -
Pumo8g02285 127 Pfam Protein tyrosine and serine/threonine kinase 16 108 IPR001245 GO:0004672|GO:0006468
Pumo8g02285 127 SUPERFAMILY Protein kinase-like (PK-like) 12 117 IPR011009 -
Pumo8g02285 127 ProSiteProfiles Protein kinase domain profile. 1 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02285 127 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 19 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02285 Pumo-Chr8 60102853 60104100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02285 11 112 MAP Kinase Kinase Kinase AT4G23050 73.529 3.30e-49 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pumo8g02285 PK_Tyr_Ser-Thr 7.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02285 - - gmx:100813707 222.246