Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02284 ATGCCTATGCGCATTGCGCACCTCACAACCACAACTCCGGTGACTTCAATGAGTAGCGGCGAGGACACAGAAACTGCAGCGTTCCGAGCTCTCGCGGATCGGTGCCGGACCCTCGAGGAGAAGCAGGTCAAACTCAGGGAGGAGTTCGACGAGCTGTTGCAGAAGAACAACCTCACAGTCAGGGACGATAACGGTAACGGTAACGGTAACGGTAACGAGGCCATTGCTGATTCAACGACCGTCGGTTTTCTTTCCGGTTTCTTCTTCTCCGGAAGTCCCTACGCCACCGTGTTGAAATGCATGGGCCACGCCGTTCACGTGCTCAGAGTTCCCTCCGCCGAGATCGTATACTGGAATCACTCAGCGGAAACTCTGTATGGATGGAAGGACTACGAAATCATTGGCCAAAGAGTAGCTAAAGTCCTAATTGCTGAAGAAAATTATGCATCTCTACAAAAAATTCTGGAAAGGTTGGTCACAGGAGTACCATGGTCTGGGCAGTTTCCTTTCAAGAAGAAGTCTGGTGAAGTATTTATGGCAATGGTAACAAAAACTCCTCTTTATGAGGATGGTGAGCTTGTTGGTGTTATAACTGTTTCAAGTGACGCAGCTATATTAAACTCTAGAAATTCAGAAAATCAAAGAACTTGCCAATCTGGTAACAATGGCCAAGCTGGAGTACAGAGGTTAAACTTCAAAAGAATTCAGTGGCCTCCACGACCAATGATTGCGCCAATGCCACAGATTGCTTCATGTGTTTCCAATCTGGCTTCAAAGTTTCTCCCAGTGCTGCATACTACTGATAACACAGGATCCAGGAGTACTTCAACAGATGCTGATGACGAAAAACTAGAGAAGAGCGACGTATATGAAACAAAACCTCATTCCAGACATCATCATAAAGAAAATACAACTGTCACAGAGGCCTCTGAGAAGGATGAGTCTACTACTGAATTTTGTCAACCTTCTAAAATTGCAGCCAGAGTCCTTGCCAAGCTTCAAACTGGGGCACGTGCAAAATGTGGGAAGGATAATGGAAATGTAAAAAATAATTGTACAGCTGATAATCCAGGAAGCAATAGAGTGAATAATGAAAATGATTCATCTGGAGGTTTAGAGCCATTAAATCAGTATCAGGATGTTGCTAATGGAGCAGATAAAGAAGAAAATCTTCATAAAAGTAATTCTTTATTTGCAATGAAGAGAGCAGATACAAAAGTTTGTGCATGTAGAGCTTCCAAAGTTTTAAAAGATACTTCTGGTAAACATTTCTCAGGGGAGTGGTGTGAATGTTTTGGTTCTCCCATTCCCCAAGACCCATTGTTAAGATTACGCTGTCAATTTGATCAGAAGAAATTGGAGCCAGAGGCTACGAATATGGTGACAGTAGATGAAGTGCAAAAGCAGCAAGAAGGGTTGCAATTGCCAAGTTCGAGGGAGAGTATAGGCAGCCATGAAAGTTCATCAAGCAAAGGGGATAATGAGTCAAACTCTGTTTTGGAGTGTGAAATCCATTGGGAAGACCTTCAATTAAGAGAGGAGATTGGACAAGGTTCATATGCTGTTGTTTATCATGGAATTTGGAATGGATCGGATGTTGCAGTCAAGGTTTACTTCGGGAATGGATACACAGAGGAGACTTTACAAGACTACAGAAAAGAGATTGATATAATGAAGAGATTGAGACACCCTAATGTATTGCTTTTCATGGGAGCAGTATATTCACAGGAAAGGCTTGCCATTGTGACAGAGTTATTACCTAGGGGAAGCCTTTTCAAAAATCTGCACAGGAACAATCAGACATTAGACATCAGAAGGCGTCTAAGGATGGCTCTTGATGTTGCTAGAGGAATGAATTATCTTCATCACAGAAATCCACCAATTGTGCATAGAGATCTGAAGTCTTCCAACCTGCTTGTAGATAAAAACTGGACTGTAAAGGTTGGAGACTTTGGCCTGTCTAGGTTAAAGAATGCAACTTTATTAACTACAAAATCTGGGAGAGGCACCGTAATGACAGCACTCACTTTTTCACTTTTTACATACAAAACATCTGACCTGAACAGCTAG 2070 0.4261 MPMRIAHLTTTTPVTSMSSGEDTETAAFRALADRCRTLEEKQVKLREEFDELLQKNNLTVRDDNGNGNGNGNEAIADSTTVGFLSGFFFSGSPYATVLKCMGHAVHVLRVPSAEIVYWNHSAETLYGWKDYEIIGQRVAKVLIAEENYASLQKILERLVTGVPWSGQFPFKKKSGEVFMAMVTKTPLYEDGELVGVITVSSDAAILNSRNSENQRTCQSGNNGQAGVQRLNFKRIQWPPRPMIAPMPQIASCVSNLASKFLPVLHTTDNTGSRSTSTDADDEKLEKSDVYETKPHSRHHHKENTTVTEASEKDESTTEFCQPSKIAARVLAKLQTGARAKCGKDNGNVKNNCTADNPGSNRVNNENDSSGGLEPLNQYQDVANGADKEENLHKSNSLFAMKRADTKVCACRASKVLKDTSGKHFSGEWCECFGSPIPQDPLLRLRCQFDQKKLEPEATNMVTVDEVQKQQEGLQLPSSRESIGSHESSSSKGDNESNSVLECEIHWEDLQLREEIGQGSYAVVYHGIWNGSDVAVKVYFGNGYTEETLQDYRKEIDIMKRLRHPNVLLFMGAVYSQERLAIVTELLPRGSLFKNLHRNNQTLDIRRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKNATLLTTKSGRGTVMTALTFSLFTYKTSDLNS 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02284 689 NCBIfam PAS domain S-box protein 113 202 IPR000014 -
Pumo8g02284 689 MobiDBLite consensus disorder prediction 344 373 - -
Pumo8g02284 689 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 271 671 - -
Pumo8g02284 689 MobiDBLite consensus disorder prediction 346 373 - -
Pumo8g02284 689 MobiDBLite consensus disorder prediction 275 318 - -
Pumo8g02284 689 MobiDBLite consensus disorder prediction 8 22 - -
Pumo8g02284 689 ProSitePatterns Protein kinases ATP-binding region signature. 515 536 IPR017441 GO:0005524
Pumo8g02284 689 Pfam PAS domain 111 202 IPR000014 -
Pumo8g02284 689 ProSiteProfiles PAS repeat profile. 112 162 IPR000014 -
Pumo8g02284 689 MobiDBLite consensus disorder prediction 265 319 - -
Pumo8g02284 689 CDD PAS 114 202 IPR000014 -
Pumo8g02284 689 Coils Coil 28 55 - -
Pumo8g02284 689 SMART serkin_6 509 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02284 689 Gene3D PAS domain 90 222 - -
Pumo8g02284 689 Gene3D Transferase(Phosphotransferase) domain 1 587 674 - -
Pumo8g02284 689 FunFam Serine/threonine-protein kinase isoform 1 500 587 - -
Pumo8g02284 689 SUPERFAMILY Protein kinase-like (PK-like) 489 670 IPR011009 -
Pumo8g02284 689 Pfam Protein tyrosine and serine/threonine kinase 509 664 IPR001245 GO:0004672|GO:0006468
Pumo8g02284 689 SUPERFAMILY PYP-like sensor domain (PAS domain) 112 202 IPR035965 -
Pumo8g02284 689 MobiDBLite consensus disorder prediction 1 22 - -
Pumo8g02284 689 MobiDBLite consensus disorder prediction 463 496 - -
Pumo8g02284 689 ProSiteProfiles Protein kinase domain profile. 509 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02284 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Pumo8g02284 689 Gene3D Phosphorylase Kinase; domain 1 502 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02284 Pumo-Chr8 60098231 60102820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02284 19 670 MAP Kinase Kinase Kinase AT4G23050 39.099 2.60e-137 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pumo8g02284 PK_Tyr_Ser-Thr 2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02284 - - gmx:100813707 1170.22