Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02276 ATGAGAAACATGTATGATTTGTACAAAATGGTTGCAAGATTTAAGATTCAAATAGTTGCTTTTGACGAGGTACGAGATGTCTATCTTGGAAAACAAACTTGGAGCTTGAAGGTCCGTGTAATCTGTGCGTGGCATATATACCCTGTTGGTGATTTGAAGAAGCATTACTCGTTTGAGATGGTTCTTCTTGACACAAGTGGTTCCAAAATCCAGGCTACAATAAGGAAACCTATGCTTAGAAAGTTTAATCGTTGTGTTGAAAATGGATGTGTATATGAGATGAACTATTTTGGTGTCATCCCGAATTCTGGTTCTTATAGGGCTACAAGGCACGATTACAGGCTTTTGTTTCATGGAAGGATTATTGTCATTCCCATTGAGGATGGAACCATCCCTATGAATAATTTGTCAATTATGGATTCTCTTCAAGTCAATGTGACAAATGGCGTTTCTGAATTTTTGATTGATGTTATGGGTGTTTTGACTGCCATTTCTGAAGAGAAAACTTCTGTTAAGGATGGCAAAACAACTCGACATATTCAGTTAGAGTTGGCTGATGACAGGGGCAAAATTCAGTGTGCTCTTTTTGGTAAGTATGTTGATACTGTGAATGAGTTGTTATCTGTTGGTGGTAGTGAGTTACCAATGTTGGATGGTGAGGTCGATCCATTGGTTTTTCTTGAAGCTATGGACTGTATTTTGGGAAGATTTTAG 714 0.3796 MRNMYDLYKMVARFKIQIVAFDEVRDVYLGKQTWSLKVRVICAWHIYPVGDLKKHYSFEMVLLDTSGSKIQATIRKPMLRKFNRCVENGCVYEMNYFGVIPNSGSYRATRHDYRLLFHGRIIVIPIEDGTIPMNNLSIMDSLQVNVTNGVSEFLIDVMGVLTAISEEKTSVKDGKTTRHIQLELADDRGKIQCALFGKYVDTVNELLSVGGSELPMLDGEVDPLVFLEAMDCILGRF 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02276 237 CDD RPA1_DBD_A_like 35 123 - -
Pumo8g02276 237 SUPERFAMILY Nucleic acid-binding proteins 21 128 IPR012340 -
Pumo8g02276 237 Pfam Domain of unknown function DUF223 59 124 IPR003871 -
Pumo8g02276 237 Gene3D - 19 129 IPR012340 -
Pumo8g02276 237 Gene3D - 138 230 IPR012340 -
Pumo8g02276 237 SUPERFAMILY Nucleic acid-binding proteins 146 207 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02276 Pumo-Chr8 59977766 59980796 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02276 28 229 Core DNA Replication Machinery Family AT2G06510 24.880 4.43e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02276 - - lja:Lj1g3v2095720.1 164.851