Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02233 ATGAAAGTTCAACTCTTTCTTTCTCTGTTTCTACTGGTTTCATTTCACATTCCTCACATGGTTGTTGGAACTGCGGAGCTTAGAGCTCTGATGGAGTTGAAGTCCTCTCTGGATCCAGAGGGCAAGATCCTTGGCTCGTGGATCAGTGATGGTGATCCATGCAGTGGCTTCTTCGAAGGGGTTGCGTGCAACGAGCACCGCAAAGTGGCTAACATCTCCTTGCAGGGAAAGGGTCTTTCGGGGTGGCTCTCTCCAGCACTGGCTGAACTCAAATGCTTGTCGGGTTTATACTTGCACTACAACAACCTTTCTGGTGAGATACCCCCACACATTTCAAATCTCACTGAACTGGTTGATCTCTATCTCGACGTGAATAGTTTATCTGGAACTATTCCTCCTGAGATCGGCAACATGGCTAGTCTACAAGTGCTGCAGTTAGGAGATAACCAGTTGGTGGGGAATATACCTACACAGATGGGTTCCTTAAAGCAGCTTAGTACTCTTGCTTTGCAATATAACAAGTTAACTGGTCAAATTCCTCTTAGCTTGGGGAACTTGGAGAAGTTAAGCAGGCTAAATTTGAGCTTCAACAACTTTAGTGGTACTGTTCCGGCAACACTAGCACATATTGAATATTTGGAAATTCTAGATATTCAGAACAATTCTTTGTCAGGAATTGTTCCGTCGGCATTGAAGAGACTTGGGGAAGGATTCCAAGGTGCAAACAACCCGGGTTTATGTGGAGTTGGGTTTTCTACTTTGAGAGCTTGCAACAAAGATCAAGGTTTAAACGTTAACCATGTTGATACCTCAGATGGAGACCAATCCAAAAATAGTAATTCTTCAAAGGCGCTCCCGGAGCCTGCAAATGTTCAGTTGCATTGTGGCCAGACCCATTGTTCAAAATCAAGGTTTCCTCAAACTGTCATCACAGCAGGTGTTACAATCGTTACTCTTACATTCATATGTGCTGGATTTTTGACATTCTTCAGATACCGCCGGCAAAAGCAGAGGATTGGCAATACATCAAGTTCTTCTTCTGAAGGGAAACTTAGTCCTGACCAGCCTAAAGAGTTCTACACAAAAAGTCCATCTGCACTTGTTAATATTGAGTATTATAGTGGATGGGATCCATTGTCTAATGGCCAAAATGCTGATGCTGGTGGATTATCTAATGAATATTTAAATCAGTTTAGGTTTAATGTGGATGAGGTTGAATCTGCAACACAGTACCTCTCGGAAGCCAATTTACTTGGTAAGAGCAAATTCTCAGCAGTTTATAAGGGAGTTCTCAGAGATGGTTCTCTTGTGGCTATTAGAAGCATTAGTGTGACATGCTGCAAAACCGAGGAAGCTGAATTTGTAAAGGGGTTGAACTTATTAACCTCTCTGAGACATGAAAACCTTGTTAGGCTGAGAGGTTTTTGTTGCTCAAGGAGCAGAGGTGAATGTTTCCTTATCTATGACTTTGCCACCATGGGTAACCTGTCTCAATATCTTGACCTAGAAGATGGAAGTGGCCATGTGCTTGAGTGGTCCAAGAGAGTTTCTATCATCAAGGGCATTGCAAAGGGTATTGGATATCTTCATAGCAATGGAGAAAGCAAACCTACAATAGTTCACCAGAATATTTCAGTGGAAAATGTTCTCCTAGACCATCAGTTTAACCCATTGATCATGGATGCTGGACTACCTAAGCTTCTTGCAGATGATGTTGTTTTCTCAGCTCTAAAAGTAAGTGCTGCAATGGGATACTTAGCTCCGGAATACATTACTACTGGACGCTTTACTGAGAAGAGTGACATATACGCATTTGGAGTTATTATTCTTCAAGTTCTATCTGGCAAGACGACAATAGGTAGTTCAATACGGACGGCAGTTGAGTCTTTCAGATTTGATGATTCTGTTGACACAAATCTTAGGGGAATATATTCTAAATCTGAAGCAGCAACACTTTCAAAGCTTGCAATACAGTGTACTCATGAGCTTCCTGACCAAAGACCAACCATGGTGGATGTGATTCAGGAGCTGGGTGTGTTATCTGCTCATTTATAA 2055 0.4219 MKVQLFLSLFLLVSFHIPHMVVGTAELRALMELKSSLDPEGKILGSWISDGDPCSGFFEGVACNEHRKVANISLQGKGLSGWLSPALAELKCLSGLYLHYNNLSGEIPPHISNLTELVDLYLDVNSLSGTIPPEIGNMASLQVLQLGDNQLVGNIPTQMGSLKQLSTLALQYNKLTGQIPLSLGNLEKLSRLNLSFNNFSGTVPATLAHIEYLEILDIQNNSLSGIVPSALKRLGEGFQGANNPGLCGVGFSTLRACNKDQGLNVNHVDTSDGDQSKNSNSSKALPEPANVQLHCGQTHCSKSRFPQTVITAGVTIVTLTFICAGFLTFFRYRRQKQRIGNTSSSSSEGKLSPDQPKEFYTKSPSALVNIEYYSGWDPLSNGQNADAGGLSNEYLNQFRFNVDEVESATQYLSEANLLGKSKFSAVYKGVLRDGSLVAIRSISVTCCKTEEAEFVKGLNLLTSLRHENLVRLRGFCCSRSRGECFLIYDFATMGNLSQYLDLEDGSGHVLEWSKRVSIIKGIAKGIGYLHSNGESKPTIVHQNISVENVLLDHQFNPLIMDAGLPKLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIILQVLSGKTTIGSSIRTAVESFRFDDSVDTNLRGIYSKSEAATLSKLAIQCTHELPDQRPTMVDVIQELGVLSAHL 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02233 684 ProSiteProfiles Protein kinase domain profile. 412 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02233 684 Pfam Protein tyrosine and serine/threonine kinase 416 677 IPR001245 GO:0004672|GO:0006468
Pumo8g02233 684 SUPERFAMILY Protein kinase-like (PK-like) 392 678 IPR011009 -
Pumo8g02233 684 Gene3D Phosphorylase Kinase; domain 1 382 490 - -
Pumo8g02233 684 FunFam Protein NSP-INTERACTING KINASE 2 136 258 - -
Pumo8g02233 684 FunFam Protein NSP-INTERACTING KINASE 2 383 490 - -
Pumo8g02233 684 Gene3D Transferase(Phosphotransferase) domain 1 493 683 - -
Pumo8g02233 684 MobiDBLite consensus disorder prediction 267 286 - -
Pumo8g02233 684 SUPERFAMILY L domain-like 26 232 - -
Pumo8g02233 684 Gene3D Ribonuclease Inhibitor 24 172 IPR032675 -
Pumo8g02233 684 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 312 677 - -
Pumo8g02233 684 MobiDBLite consensus disorder prediction 340 359 - -
Pumo8g02233 684 FunFam Leucine-rich repeat receptor-like kinase 25 133 - -
Pumo8g02233 684 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Pumo8g02233 684 Pfam Leucine Rich Repeat 213 234 IPR001611 GO:0005515
Pumo8g02233 684 FunFam Protein NSP-INTERACTING KINASE 2 491 681 - -
Pumo8g02233 684 Gene3D Ribonuclease Inhibitor 173 243 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02233 Pumo-Chr8 59464200 59468026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02233 3 525 Miscellaneous Gene Families AT4G22730 57.331 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Pumo8g02233 PK_Tyr_Ser-Thr 2.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02233 - - gmx:100797612 1266.52