Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02227 ATGGCAACTACACTCATGAAGCTTGTTAATTTCCTGGTTCTCATGAACCTTGTGACCAGCATGGCCGTTAGCAGACAGTCCAACCCCAACCCGAACCCCAACCCAGCAGAGTTCGTGAAGTCCTCGTGCAGGGCCACACGGTACCCTGTTTTATGCGTCCAATCTCTGTTGGCCTACGCAAGCGTGATTCGGCGAAGCGACCGAGAACTAGCCATGACCGCTCTGTCCGTAAGCATATCGAGGACCCGATCGTCCGCATCGTTCGTGAAGAAGATGTTGAAAGCGAAAGGCATGAAGCCAAGGGAGTACAGAGCGGTACAGGACTGCGTGGAGAACATAGGTGACAGCGTGGACCGTCTGAGGCAATCGGTTAGGGAGTTGGGCCGAATGGGCGCCGCCGTGGGAGAGGACTTCGTCTGGCACATGAGCAACGTCCAGACTTGGGTCAGTGCTGCCCTCACCGACGACAACACTTGTCTTGATGGCTTCGCTGGCTCCGCCATGAACGGAAACGTCAAGGCTGCCATAAAGGACAGGGTTGTCCATGTTGCTCAAGTCACCAGCAACGCTCTCGCCTTGGTTAATCGCTTTGCCTCAAGACACCCAACTCAAACTCCTTAA 621 0.5491 MATTLMKLVNFLVLMNLVTSMAVSRQSNPNPNPNPAEFVKSSCRATRYPVLCVQSLLAYASVIRRSDRELAMTALSVSISRTRSSASFVKKMLKAKGMKPREYRAVQDCVENIGDSVDRLRQSVRELGRMGAAVGEDFVWHMSNVQTWVSAALTDDNTCLDGFAGSAMNGNVKAAIKDRVVHVAQVTSNALALVNRFASRHPTQTP 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02227 206 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 197 IPR035513 -
Pumo8g02227 206 FunFam Pectin methylesterase inhibitor 1 34 197 - -
Pumo8g02227 206 Pfam Plant invertase/pectin methylesterase inhibitor 38 193 IPR006501 GO:0004857
Pumo8g02227 206 SMART PMEI_2 34 193 IPR006501 GO:0004857
Pumo8g02227 206 CDD PMEI-like_3 41 199 - -
Pumo8g02227 206 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 193 - -
Pumo8g02227 206 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 197 IPR035513 -
Pumo8g02227 206 NCBIfam pectinesterase inhibitor domain 11 195 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02227 Pumo-Chr8 59402614 59403234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02227 32 194 Carbohydrate Esterase AT3G14310 31.098 3.56e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02227 - - gmx:100776636 312.768