Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02202 ATGGCTTCTTCTCTCTCGGTGTCACTGCTTGTGGTTTTGACTTGCATATTTCATGCAGCAACAGTGACATGTACACACCACCACGACCGTGCATTCAAAACATTCTCTTCCACCAACTCCTCCAAGAGCAACCACCATTGGATCGGACCCGTCGGTCACCGTAAAATCACCGTTGACATTAACGGCGGTGGCCACTACCGGTCCGTCCAAGACGCCGTCAATGCCGTCCCCGACAACAACAGAAAGAATGTCCTTATTCAAATCAGCGCTGGATGCTACAAAGAAAAGGTGGTTGTGCCCGTGACAAAGCCGTACATAACGTTTGAGGGCGCGGGTAAGGAAGTGACAGTGATAGAATGGCATGATCGAGCGAGTGACCCTGGCCCCAGTGGACAGCAATTGCGTACTTACAGAACCGCTTCTGTTACTGTTTTTGCCAGCTATTTTTCTGCTAGGAACATCAGCTTCAAGAACACAGCACCTGCACCAATGCCGGGGATGCAGGGATGGCAAGCGGTGGCGTTTCGTATATCCGGGGACAAAGCATACTTCTCCGGCTGCGGTTTCTACGGTGCACAAGACACACTTTGTGACGATGCTGGAAGACATTACTTCAAGGAATGTTATATTGAGGGATCCATCGATTTCATTTTTGGGAATGGACGCTCCATGTACAAGGATTGCGAGCTACACTCAATAGCAACGAGGTTTGGTTCGATAGCAGCCCACGATAGGAAACAGGCAGAGGAGAAGACAGGATTTGCATTCGTACGATGCAGGGTGACAGGTACGGGTCCGCTATATGTGGGGCGAGCAATGGGACAGTACTCGAGAATTGTTTACTCCTACACTTATTTCGATGATATCGTTGCACATGGCGGTTGGGATGATTGGGACCATGCGGACAATAAGAACAAGACTGTGTTCTTTGGAGTGTACAAGTGTCGGGGACCAGGAGCAGAGGCTGTACGTGGGGTCTCATGGGCCCGAGAGTTAGATTTCGAATCGGCCCATCCATTTATCAGGAAGAGTTTCGTCAATGGGAGACACTGGATCGCGCCATCTGATGCTTAG 1074 0.5019 MASSLSVSLLVVLTCIFHAATVTCTHHHDRAFKTFSSTNSSKSNHHWIGPVGHRKITVDINGGGHYRSVQDAVNAVPDNNRKNVLIQISAGCYKEKVVVPVTKPYITFEGAGKEVTVIEWHDRASDPGPSGQQLRTYRTASVTVFASYFSARNISFKNTAPAPMPGMQGWQAVAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAHDRKQAEEKTGFAFVRCRVTGTGPLYVGRAMGQYSRIVYSYTYFDDIVAHGGWDDWDHADNKNKTVFFGVYKCRGPGAEAVRGVSWARELDFESAHPFIRKSFVNGRHWIAPSDA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02202 357 ProSitePatterns Pectinesterase signature 2. 210 219 IPR033131 -
Pumo8g02202 357 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 52 353 - -
Pumo8g02202 357 FunFam Pectinesterase 51 354 - -
Pumo8g02202 357 SUPERFAMILY Pectin lyase-like 53 354 IPR011050 -
Pumo8g02202 357 Pfam Pectinesterase 56 348 IPR000070 GO:0030599|GO:0042545
Pumo8g02202 357 Gene3D - 52 356 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02202 Pumo-Chr8 59075532 59079168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02202 5 357 Carbohydrate Esterase AT5G47500 72.853 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02202 - - gmx:100816190 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02202 8 59075532 59079168 Pumo8g02202 8 59075532 59079168 ECH
Pumo8g02202 8 59075532 59079168 Pumo4g01672 4 21223455 21228378 PCT