Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02201 ATGGGTAAGGTTCACGGATCACTTGCACGTGCCGGTAAGGTTAGAGGCCAAACCCCCAAGGTGGCCAAGCAGGATAAGAAGAAGAAGCCACGTGGCCGCGCCCACAAGAGGATGCAGTACAATCGCCGATTCGTCACCGCCGTGGTGGGATTCGGCAAGAAGAGGGGACCCAACTCGTCTGAGAAGTGA 189 0.5714 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02201 62 MobiDBLite consensus disorder prediction 22 40 - -
Pumo8g02201 62 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 1 62 - -
Pumo8g02201 62 Pfam Ribosomal protein S30 3 59 IPR006846 GO:0003735|GO:0005840|GO:0006412
Pumo8g02201 62 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02201 Pumo-Chr8 59072849 59074129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02201 1 62 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 96.774 1.14e-30 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02201 K02983 - dcr:108209471 118.627