Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02196 ATGGTGGAAAAGATGAATGGGGGAGTTATGGAAGATGTAGCAATAATTGGAGGATTGATAGGAGTCCAACTTATCTACGCAGGGAATGCTGTGTTGATGAGTTATTCTATGTCATTGGGCTTCAGCTCTCTTACCATTATCATTTTAACTTCTCTGGCAACATTCATTATTCTCTTCCCCATTGCCTTTTGTGTTGAAAGGAGTAAGTGGCCCAAACATTGCAGTTTCAGGTTGATTACACAGCTATTGCTTCTTTCATTTGGAGGACTAGTCTTCCAGTATTTATTCCTCAAAGGAATCAATCTAACTTCGCCAGCAATGGGAACTGCCATGCCAAACATTGCCCCAGGTCTCATCTTCATCATCGCATGGATTTCTGGGTTAGAGAAAGTCAACTTAAGCAACAAGTATAGTAAATTAAAAATCTTGGGAACATTGCTTTGTGTCTTGGGAGCTCTTACAATGAGCATAATGCAAAGCATTTCTGCTCCTGCAACCGTAAATGCCACAGTCCAATTATCACCGCCACCATCAGGTTTTACCTTTGACATACAGAAGATACTCGGTTGCGTCTATCTCGTGGTTGCAGTCGTGATTTTGTCAAGCAACGTTGTCCTGCAGGCTTTTGCTCTTGGAGATTTTCCTGCACCCATGTCCTTGGGTGCAATAACGTCCTTGATTGCGGCGTTCATGACTGCAATTGCTCAGTTACTTGAAGACCACAAACTGAAAACTGGTTGGCTACTTGTGAGGTCTGGAGACTTGATTGGCTATTTTATTCTGGCAGGAGCTGTGAGTGGAATATGCCTGAGCTTCAACGGGTGGGCACTGAAGAAGAGAGGGCCAGTGTTTGTCTCCATGTTTAGCCCCATTGGTACAGTTTGCTCTGTTATTTTCTCGGTAGTAACACTAGAAGACACTATTAGTATTGGAAGTCTTGCAGGCATGTTTCTCATGTTCACTGGGCTCTACTTAGTTCTTTGGGCCAAAGGGAAAGAAGGACACGCAGATGGAGATGATGGCTTAGCGAGTGAGTGTCTGTGTGATGCAGAGAGGCCTCTTTTATCTTAA 1071 0.436 MVEKMNGGVMEDVAIIGGLIGVQLIYAGNAVLMSYSMSLGFSSLTIIILTSLATFIILFPIAFCVERSKWPKHCSFRLITQLLLLSFGGLVFQYLFLKGINLTSPAMGTAMPNIAPGLIFIIAWISGLEKVNLSNKYSKLKILGTLLCVLGALTMSIMQSISAPATVNATVQLSPPPSGFTFDIQKILGCVYLVVAVVILSSNVVLQAFALGDFPAPMSLGAITSLIAAFMTAIAQLLEDHKLKTGWLLVRSGDLIGYFILAGAVSGICLSFNGWALKKRGPVFVSMFSPIGTVCSVIFSVVTLEDTISIGSLAGMFLMFTGLYLVLWAKGKEGHADGDDGLASECLCDAERPLLS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02196 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 332 - -
Pumo8g02196 356 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020
Pumo8g02196 356 Pfam EamA-like transporter family 20 156 IPR000620 GO:0016020
Pumo8g02196 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 157 - -
Pumo8g02196 356 PANTHER WAT1-RELATED PROTEIN 18 334 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02196 Pumo-Chr8 59017896 59020631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02196 3 337 Nodulin-like Gene Family AT5G47470 58.160 1.11e-131 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02196 - - gmx:100784734 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02196 8 59017896 59020631 Pumo4g01678 4 21327556 21330556 PCT