Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02186 ATGGTGAAGATAGCTTTGGGTAGCTTTGATGACTCTTTTAGCGTTGCCTCTCTCAAGGCTTATTTCGCAGAGTTCCATGCCACTCTGATTTTCGTGTTCGCTGGCGTTGGATCAGCCATCGCTTACATGGTTGGTTGTCTTGGTATTATACAGACTGAGCTTACAAAAGATGCAGCCTTGGATCCAACGGGCCTGGTGGCAGTAGCTGTGGCCCATGCATTTGCACTATTTGTAGGTGTCTCCATCGCAGCCAACATCTCAGGTGGCCATTTGAACCCAGCTGTCACTTTTGGATTGGCTATTGGAGGCAACATCACCCTCATTACTGGTTTCTTGTACTGGATTGCCCAATTGTTGGGTTCTATCGTCGCATGCCTCCTCCTCAATTTGATCACCGCTAAGAGCATTCCAACCCACGCACCGGCTCTTGGTGTGAACGCTTTCCAAGGTGTCGTGTTTGAGATTATCATTACATTTGGGTTGGTTTACACTGTGTATGCAACTGCAGCTGACCCCAAGAAGGGCTCATTGGGTATCATTGCACCCATTGCTATTGGGTTCATTGTGGGTGCCAACATCTTAGCTGCTGGCCCATTCAGCGGCGGTTCAATGAACCCAGCTCGCTCTTTCGGCCCAGCTGTGGTCAGTGGAAACTTCGCTGACAACTGGATCTACTGGGTTGGCCCATTGATTGGAGGAGGTTTGGCTGGCTTGATTTATGGAGACGTCTTCATTGGTTCCTATGCCCCTGTCCCAGCCTCTGAAACCTACCCTTGA 777 0.4981 MVKIALGSFDDSFSVASLKAYFAEFHATLIFVFAGVGSAIAYMVGCLGIIQTELTKDAALDPTGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTFGLAIGGNITLITGFLYWIAQLLGSIVACLLLNLITAKSIPTHAPALGVNAFQGVVFEIIITFGLVYTVYATAADPKKGSLGIIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGNFADNWIYWVGPLIGGGLAGLIYGDVFIGSYAPVPASETYP 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02186 258 PANTHER AQUAPORIN-8 4 246 IPR034294 -
Pumo8g02186 258 NCBIfam MIP family channel protein 23 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo8g02186 258 ProSitePatterns MIP family signature. 90 98 IPR022357 -
Pumo8g02186 258 Pfam Major intrinsic protein 14 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo8g02186 258 SUPERFAMILY Aquaporin-like 17 246 IPR023271 -
Pumo8g02186 258 Gene3D Glycerol uptake facilitator protein. 2 249 IPR023271 -
Pumo8g02186 258 CDD MIP 19 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo8g02186 258 FunFam Probable aquaporin TIP1-1 2 256 - -
Pumo8g02186 258 PRINTS Major intrinsic protein family signature 72 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo8g02186 258 PRINTS Major intrinsic protein family signature 109 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo8g02186 258 PRINTS Major intrinsic protein family signature 186 208 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo8g02186 258 PRINTS Major intrinsic protein family signature 153 171 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo8g02186 258 PRINTS Major intrinsic protein family signature 223 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo8g02186 258 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02186 Pumo-Chr8 58937042 58939344 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02186 1 255 Major Intrinsic Protein MIP AT5G47450 76.172 1.54e-131 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02186 K09873 - gmx:100527333 436.032