Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02168 ATGGGAGACTTGGCCTTGCATCCTCTGCAGTCGCAAGTGATGGATGCATTCATCTTCCTCTTCCTCTTCCACTTGTGTGTTTTCAGCTTCCAAACTAAGGTGACCTATGCAACAACAAAGTGTGGAGATGCAGGTCCTGACATCCACTTTCCATATCAGATAAAAGGTCAGCACCAACAATATGATTATGATGCCCTTCCTGGTTTTGAGCTTCTTTGCAAAGACAACCTCACCACTATCCACTTTCCATCTTATGGGGATTTGGTAGTGAAATCCATTTCCTATGACACCAAAAATATTCACCTCCTTGACCCCAAAAACTGTGCCCATCATGTCTTTCTCAACCTCAATCTCTCCCTCACACCGTTCCATTATTTTTATGTTCTGACAAACTATACATACCTCAATTGCTCCACCAGCCTTCCACACCCTTTTGTGGAGGTTCCATGTTTAAGTGCTTCAAGTTATCATGTCTACACAGTTGACCCTGCACTGCCTGTGCCGGGTTCATGTGAAGGAGTCAAAACCGTTGCCATTCCTTTTGCATATAGCCCTTATCTCTCAGACAAAAGTCTTGGTCTTAGATTAACATGGAACTTGCGTGAACCTGAAGACAACGAAGCAGTAAACCTGAATAGAGGTTCCCACAAATCGCGCAATATAGTTATAGGGTCTAGCATCTGTGTTTTCGTGATGGCCATGGTATTGCTTATAAGCATAAAGGTTCGTGGTGCCACGAGGAATCTTCATCAGAAAGAAGGCCAGTTATTGCAGAGCTAG 780 0.4385 MGDLALHPLQSQVMDAFIFLFLFHLCVFSFQTKVTYATTKCGDAGPDIHFPYQIKGQHQQYDYDALPGFELLCKDNLTTIHFPSYGDLVVKSISYDTKNIHLLDPKNCAHHVFLNLNLSLTPFHYFYVLTNYTYLNCSTSLPHPFVEVPCLSASSYHVYTVDPALPVPGSCEGVKTVAIPFAYSPYLSDKSLGLRLTWNLREPEDNEAVNLNRGSHKSRNIVIGSSICVFVMAMVLLISIKVRGATRNLHQKEGQLLQS 259
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02168 259 Pfam Wall-associated receptor kinase galacturonan-binding 40 104 IPR025287 GO:0030247
Pumo8g02168 259 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 16 211 IPR046948 -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02168 68 218 C3H Transcription Factor Family AT2G25410 32.298 9.46e-15 71.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02168 - - gmx:100818574 443.351