Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02163 ATGAGCAATGGTACTCTTGCAGACATCCTATTTGGACAATCCAAACCCAATTGGAATATAAGGGTTGGATTTGCTTTGGGGATTGCAAGAGGGTTGGTGTACTTACACGAAGAGTGTGACATCCCCATCATTCATTGTGATATTAAACCTCAAAATATACTCATAGATGAACATTTCAATACAAAGATCTCTGACTTTGGGTTGGCCAAGTTGTTGTTGTCTGACCAAAGTAGAACCAATACCATGATCCGAGGAACTCGAGGATATGTGGCTCCTGAATGGTTCAAGAACGTTCCTGTGACGGTTAAAGTGGATGTTTACAGCTTTGGGGTAATGTTAATGGAAATTATTTGCTGCAGAAGAAGTGTGTTGATGATGGAGTCCGGGGAAGAAGAGAAGGCAATACTGACAGATTGGGCTTGTGATTGCTATATAGAAGGGAGAATAGATGCTCTGGTGGAGGATGAGGAGGAGGCCTTATCTGACAATGGCAGGATACAAAAGTGGGTGAAAATAGCAATATGGTGCATTCATGAGCAACCTGAAATGAGACCAACAATGGGGATGGTCATGCAAATGCTAGAAGGCTTTGTTGAAGTCCCTAACCCACCACCACTTTTTTCCATACATTCCATATCTTAA 642 0.4206 MSNGTLADILFGQSKPNWNIRVGFALGIARGLVYLHEECDIPIIHCDIKPQNILIDEHFNTKISDFGLAKLLLSDQSRTNTMIRGTRGYVAPEWFKNVPVTVKVDVYSFGVMLMEIICCRRSVLMMESGEEEKAILTDWACDCYIEGRIDALVEDEEEALSDNGRIQKWVKIAIWCIHEQPEMRPTMGMVMQMLEGFVEVPNPPPLFSIHSIS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02163 213 Pfam Protein kinase domain 2 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02163 213 Gene3D Transferase(Phosphotransferase) domain 1 1 199 - -
Pumo8g02163 213 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Pumo8g02163 213 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 205 - -
Pumo8g02163 213 SMART serkin_6 1 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02163 213 SUPERFAMILY Protein kinase-like (PK-like) 1 195 IPR011009 -
Pumo8g02163 213 ProSiteProfiles Protein kinase domain profile. 1 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02163 213 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02163 Pumo-Chr8 58693947 58694588 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02163 1 196 Receptor kinase-like Gene Family AT1G60800 39.000 2.75e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo8g02163 Pkinase 2.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02163 - - gmx:100789263 399.823