Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02127 ATGAATTGTTTCTTCTTCAAAAACAAATCAAAATCGGACCCAGAAATACCAAGAGGAAGGAAGAAGAAAAATCAGGTGGGGAATGGAGCAACCAAGTCCCCCAGCTCGCTACCATCGCCGAGGAGCATAAAGGAACTGTACAAAGAGAAAGAGCACAATTTCAGAATTTTCACTTTGCAAGAGCTGGTAGATGCAACACATGGTTTCAATAGGATGCTAAAGATTGGTGAAGGGGGTTTCGGGAAAGTATATAGGGGAACAATTAAACCTGACCCTGAACATGGAGGTGATCCTATTGTGGTCGCAATAAAAAAACTTAACACGCGTGGCTTACAGGGGCATAAAGAATGGCTTGCAGAAGTTCAATTTCTCAGCGTTGTTAACCACCCGAATTTGGTTAAGCTTCTGGGATACTGCTCCGTAGATAGTGAAAAAGGAATCCAACGGTTGTTGGTGTATGAGTTCATGTCTAACAGGAGTTTGGAAGATCATCTTTTCAGTCTTTCTTTACCTCATTTGCCTTGGAAAACAAGATTGCAAATCATGCTCGGTGCTGCTCAAGGATTACATTATCTACATAACGGTTTGGAGGTTAAGGTGATCTACCGAGATTTCAAATCTTCAAATGTGTTATTGGACAAGAAATTCCATCCCAAGCTTTCAGATTTCGGTCTTGCTAGGGAGGGGCCAACGGGTGATCAGACTCATGTATCTACTGCGGTTGTGGGGACACAGGGATATGCTGCCCCCGAGTATGTTGAAACAGGTCATCTCAAAGTTCAGAGTGACATATGGAGTTTCGGTGTGGTACTTTATGAGATCCTCACGGGAAGGCGTGCATTGAATAGAAACCGTCCAATAGGGGAACAAAAGCTTATAGAGTGGGTTAAAAATTTCCCTGCTAACAGTAGCAGATTCAGCACCATCATTGACCCACGTCTCAAGAACCAATATTCTCTTGGTGCAGCTCGGAAAGTAGCCAAGTTGGCAGATAGCTGCTTGAAGAAGAATCCTGAAGATAGGCCATCCATGAGTCAGATAGTGGAACGCTTGAAGCAAGCATTGCAGGAGTCAGAAACCAAAAACACTCCGCACAATATGACTTCTAAATCCACTCAATCTAAATTGGTCCCAAGTGGTAAATAG 1146 0.4328 MNCFFFKNKSKSDPEIPRGRKKKNQVGNGATKSPSSLPSPRSIKELYKEKEHNFRIFTLQELVDATHGFNRMLKIGEGGFGKVYRGTIKPDPEHGGDPIVVAIKKLNTRGLQGHKEWLAEVQFLSVVNHPNLVKLLGYCSVDSEKGIQRLLVYEFMSNRSLEDHLFSLSLPHLPWKTRLQIMLGAAQGLHYLHNGLEVKVIYRDFKSSNVLLDKKFHPKLSDFGLAREGPTGDQTHVSTAVVGTQGYAAPEYVETGHLKVQSDIWSFGVVLYEILTGRRALNRNRPIGEQKLIEWVKNFPANSSRFSTIIDPRLKNQYSLGAARKVAKLADSCLKKNPEDRPSMSQIVERLKQALQESETKNTPHNMTSKSTQSKLVPSGK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02127 381 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 156 365 - -
Pumo8g02127 381 Gene3D Transferase(Phosphotransferase) domain 1 156 377 - -
Pumo8g02127 381 MobiDBLite consensus disorder prediction 355 381 - -
Pumo8g02127 381 Gene3D Phosphorylase Kinase; domain 1 48 155 - -
Pumo8g02127 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Pumo8g02127 381 MobiDBLite consensus disorder prediction 1 41 - -
Pumo8g02127 381 SUPERFAMILY Protein kinase-like (PK-like) 51 351 IPR011009 -
Pumo8g02127 381 ProSitePatterns Protein kinases ATP-binding region signature. 75 105 IPR017441 GO:0005524
Pumo8g02127 381 CDD STKc_IRAK 75 353 - -
Pumo8g02127 381 Pfam Protein tyrosine and serine/threonine kinase 74 351 IPR001245 GO:0004672|GO:0006468
Pumo8g02127 381 ProSiteProfiles Protein kinase domain profile. 69 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02127 381 MobiDBLite consensus disorder prediction 26 40 - -
Pumo8g02127 381 PANTHER OS01G0588500 PROTEIN-RELATED 33 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02127 Pumo-Chr8 58295217 58298134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02127 1 351 Glycoside Hydrolase AT3G07070 42.700 8.52e-96 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pumo8g02127 PK_Tyr_Ser-Thr 6.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02127 - - gmx:100782248 690.649