Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02120 ATGAAAATGCCACCGGAAAACAAGAGAGAAAAGTATGTTACACTCCCTGAAAAAAGTAATCATCATTCCAAGGCAGTGGTAAAAGAGGAAAATCCTGAGACAAAGCCTTTGGATATATCTCCTTCTAAGCATAAGTTGAAAGGAAATTTTAATAGATTGTGGGTCTCATCAGACAGGAAAGTAGAGCAAGGTTTGTTGGCTAAATCAGAATGTCCTTGGAGGTCTGACAAAGGTTCCTCCAAATTTAAGTTGGGTGATGATAAAAATGAAGGCAAGAGAAAGAAAGTGGTTTCTTTTGTATTGCCTGACAGGTCTAAAAGAGCTATCAAGACTAAAGGTGCACTGAATCATTTTGGGCAGAAGCCTTTGAAAAAGAAGGGAAATGCTGCTTCTGAAGGTATGGGTGAATTAGTAAACCCTGATGAAAATATTGAAGACCTCCAAATTTTTCTGAAATCACATGAGTTCGATGTAACTGCTACTCCCTCTTCTCATTCTAATTTCACCGGTGATGAGAATGACTCAGATGTAACCCGAAAAAAAGTGAGGAAAACATTACGGTTGTTTCAAGTTGTTTCTAGAAAGCTTTTACAGGAAGCGGAATCAAAGTTAAATGAGCCAGGAAATAGAAAGAGGGTTGATTTAATTGCTGCAAGGATCCTTAAGAAGAATGGGAATCATGTTAACACAGGCAAGCAGATACTGGGCCCTGTCCCCGGGGTTGAAGTTGGTGATGAATTTCAATATAGGGTGGAGCTTAATATAGTTGGCCTTCATCGTCAGATTCAGGGTGGCATAGATTATGTGAAGCACAATGGTAAGATCCTTGCGACTAGTATTGTTGCTTCAGGGGGCTATGCTGATTATTTGGTTAATTCGGATGTCCTGATATATACAGGGCAGGGTGGGAATGTGATGAACACTGATAAAAAACCTGAAGATCAGAAGCTTGAGCGGGGCAATCTTGCTTTGAAGAACAGTAGTGAGGAAAAGAATCCTGTTAGGGTGATTCGCGGCTCTGAATCAATAATGGATGACAAGTACAAGACATATGTTTATGATGGACTGTATGTAGTTGAGTCATGTTGGCAGGACAGGGCATCACATGGGAAGCTGGTTTATAAGTTTCGCCTGCAAAGAATTCCTGGTCAACCGAAGCTTTCTTTCAAGAAGTGA 1176 0.4039 MKMPPENKREKYVTLPEKSNHHSKAVVKEENPETKPLDISPSKHKLKGNFNRLWVSSDRKVEQGLLAKSECPWRSDKGSSKFKLGDDKNEGKRKKVVSFVLPDRSKRAIKTKGALNHFGQKPLKKKGNAASEGMGELVNPDENIEDLQIFLKSHEFDVTATPSSHSNFTGDENDSDVTRKKVRKTLRLFQVVSRKLLQEAESKLNEPGNRKRVDLIAARILKKNGNHVNTGKQILGPVPGVEVGDEFQYRVELNIVGLHRQIQGGIDYVKHNGKILATSIVASGGYADYLVNSDVLIYTGQGGNVMNTDKKPEDQKLERGNLALKNSSEEKNPVRVIRGSESIMDDKYKTYVYDGLYVVESCWQDRASHGKLVYKFRLQRIPGQPKLSFKK 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02120 391 ProSiteProfiles YDG domain profile. 236 380 IPR003105 -
Pumo8g02120 391 MobiDBLite consensus disorder prediction 1 42 - -
Pumo8g02120 391 SMART G9a_1 231 384 IPR003105 -
Pumo8g02120 391 Pfam SAD/SRA domain 235 384 IPR003105 -
Pumo8g02120 391 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 18 386 - -
Pumo8g02120 391 SUPERFAMILY PUA domain-like 218 387 IPR015947 -
Pumo8g02120 391 MobiDBLite consensus disorder prediction 1 43 - -
Pumo8g02120 391 Gene3D - 218 391 IPR036987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02120 Pumo-Chr8 58132187 58133362 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02120 87 385 Su(var)3-9 homologs AT1G73100 37.134 1.39e-41 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02120 K11420 - gmx:100803378 569.311