Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02102 ATGGCTATCCATCAACTCTTTAGTAGAACTGATGAGGCAAATAGTTTGTGGGCTCGAGCATTTGCATGCACGGTTAATTATACATTGGCTGTATTAGCAAAATCCTTCCTCAAAATAAGGATTCTCTTGGCAAGAATGCTACTCGTGGCATCTGGGTACACTGTGGCTATGGTGGGGGATGGTATCAATGATTCACCTGCACTTGTGGCAGCGGATGTGGGAATGGCTATAGGTGCTGGTTCAGACATTGCTATTGAGGCTGCTGATATTGTCCTGATGAAGAGCAACTTGGAGGATGTCATAACTGCAATTGACCTTTCCAGAAAAACATTTTCCTGTATACGCCTGAATTACTTTTGGGCTTTGGGTTATAACTTGCTTGGCATTCCAATTGCTGCTGGAGCTCTTTTCCCCTCTACAAGGTTCAGATTGCCACCCTGGATTGCCGGGGCTGCTATGGCTGCCTCCTCTGTCAGTGTTGTTTTCTGTTCTCTGTTCTCTGTTGTTGAAATATTACAGAAGACCCAGGAAGCTGGACAACCTTGA 546 0.4524 MAIHQLFSRTDEANSLWARAFACTVNYTLAVLAKSFLKIRILLARMLLVASGYTVAMVGDGINDSPALVAADVGMAIGAGSDIAIEAADIVLMKSNLEDVITAIDLSRKTFSCIRLNYFWALGYNLLGIPIAAGALFPSTRFRLPPWIAGAAMAASSVSVVFCSLFSVVEILQKTQEAGQP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02102 181 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 48 166 - -
Pumo8g02102 181 Gene3D - 13 125 IPR023214 -
Pumo8g02102 181 Pfam haloacid dehalogenase-like hydrolase 48 97 - -
Pumo8g02102 181 NCBIfam HAD-IC family P-type ATPase 50 142 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo8g02102 181 PRINTS P-type cation-transporting ATPase superfamily signature 81 93 - -
Pumo8g02102 181 PRINTS P-type cation-transporting ATPase superfamily signature 58 77 - -
Pumo8g02102 181 PRINTS H+-transporting ATPase (proton pump) signature 58 74 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo8g02102 181 PRINTS H+-transporting ATPase (proton pump) signature 89 114 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo8g02102 181 SUPERFAMILY HAD-like 51 164 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02102 Pumo-Chr8 58022344 58024944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02102 48 166 Primary Pumps ATPases AT1G63440 89.916 1.55e-66 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02102 K17686 - gmx:100816893 200.675