Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02083 ATGGCTGGTTTGGATTTAGGCACGGCTTCACGCTTCGTCCAAAGTCTCCACAGACCAGACTTCGACCACCAGCAACACGAATCCGAGGAAGACGCCAAACAACAATCAGCAGAACAACCGTTCTCAGCCGAAGATGGGCCCCACCACGGCGACCTGGTCGGGCGGCGGCCGCGGGGGCGTCCGCCGGGGTCCAAGAACAAGCCGAAGCCGCCGGTCATCATAACGCGGGAGAGCGCCAACACGCTCCGCGCCCACATCCTCGAAGTCGGCACCGGCTGCGACGTCTTCGACAGCGTCGCCAGCTACGCACGCCGCCGCCAGCGCGGGATCTGTATTCTCAGCGGCAGCGGCACTGTCACGAATGTGAGCCTGCGGCAGCCGGCGTCGGCGGGCGCGGTGGTCACGCTTCACGGCAGGTTCGAGATACTTTCTCTAGCGGGATCGTTCCTGCCTCCGCCGGCGCCTCCGGGGGCGACGAGTCTGAGCATATACCTCGCCGGAGGACAGGGGCAGGTGGTGGGTGGGAGTGTGGTCGGGGAGTTGACCGCGGCGGGACCGGTGATTGTGATGGCGGCGTCGTTTACGAACGTGGCTTATGAAAGGTTACCGTTGGAGGAAGAAGAACAGGTTCAGATATCTGGTGGTGGTGGTGGTGGTACCAATAGTAATAATAATAATAACAACCCCTTTCCTGACCCTTCCTCGGGACTTCCTTTCTTCAATTTACCCATGAATGTTCAATTGCCTGTGGATGCCTGGGCGGGAAACTCAACTACACGTTCACCATTTTGA 792 0.601 MAGLDLGTASRFVQSLHRPDFDHQQHESEEDAKQQSAEQPFSAEDGPHHGDLVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGTGCDVFDSVASYARRRQRGICILSGSGTVTNVSLRQPASAGAVVTLHGRFEILSLAGSFLPPPAPPGATSLSIYLAGGQGQVVGGSVVGELTAAGPVIVMAASFTNVAYERLPLEEEEQVQISGGGGGGTNSNNNNNNPFPDPSSGLPFFNLPMNVQLPVDAWAGNSTTRSPF 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02083 263 CDD DUF296 83 166 IPR005175 -
Pumo8g02083 263 MobiDBLite consensus disorder prediction 16 34 - -
Pumo8g02083 263 Gene3D - 82 213 - -
Pumo8g02083 263 ProSiteProfiles PPC domain profile profile. 79 215 IPR005175 -
Pumo8g02083 263 FunFam AT-hook motif nuclear-localized protein 82 209 - -
Pumo8g02083 263 PIRSF ESCAROLA 5 249 IPR014476 GO:0003680
Pumo8g02083 263 MobiDBLite consensus disorder prediction 208 236 - -
Pumo8g02083 263 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 27 219 IPR014476 GO:0003680
Pumo8g02083 263 Pfam Plants and Prokaryotes Conserved (PCC) domain 83 196 IPR005175 -
Pumo8g02083 263 MobiDBLite consensus disorder prediction 214 234 - -
Pumo8g02083 263 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 211 - -
Pumo8g02083 263 MobiDBLite consensus disorder prediction 44 58 - -
Pumo8g02083 263 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02083 Pumo-Chr8 57779227 57780834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02083 1 263 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 61.812 9.91e-97 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02083 - - gmx:100810911 399.438