Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02074 ATGCGTGTCCTCTTTCTTTTTCTGTTTTTCCATTTTCATTTCCCTGAAACCATTTCTGCTCCAATCTCAGAATACCGCGCCCTTCTCTCTCTCCGTTCAGCCATTACCGACGTCACCCCACCCGTTCTCTCTTCGTGGAACGCCTCCACCCCTTACTGTTCCTGGCTCGGCGTAACCTGCGACAACCGCCGCCACGTCACCGCCCTCAACCTCACCGGACTCGACCTCTCCGGCACGCTCTCCGGCGACGTCGCCCACCTCCCATTCCTCTCCAACCTCTCCCTCTCCGCGAATAAATTCTCCGGGCCCATCCCTCCGGCGCTCTCCGCCCTCTCCGGCCTCCGCGTCCTCAACCTCTCCAACAATGTCTTCAACGAAACCTTCCCCTCCGAGCTCTCGCGCCTCCAGAGCCTCGAGGTCCTCGACCTCTACAACAACAACTTGACCGGCGAGCTCCCTCTCGCCGTCGCGCAGATGCAGAACCTCCGCCATTTGCATCTCGGCGGCAACTTCTTCTCCGGCCAGATCCCGCCGGAGTACGGACGCTGGCAGCGCCTCAAGTACCTCGCCGTCTCTGGCAACGAGCTCAACGGAAAAATCCCGCCGGAGATCGGGAACCTCACCAGTCTCAGGGAGCTCTACATCGGCTACTACAACATCTACACCGGCGGCATTCCGCCGGAGATCGGGAACCTGTCGGAGCTGGTGAGGCTCGACGCCGCGTACTGCGGGTTGTCCGGCGAGATTCCGGCGGCGCTGGGGAAGCTTCAGAAGCTGGACACGCTGTTCCTTCAGGTGAATGCATTGTCAGGGTCTCTGACCCCGGAGCTGGGGAATCTGAAGAGCCTGAAATCGGTGGATTTGTCTAACAACATGCTCTCCGGTGAGATTCCGGCGAGTTTCGGTGAGCTGAAGAATATTACGCTTCTGAATCTGTTCAGGAACAAGCTTCACGGAGCTATACCGGAGTTTATAGGGGAGCTTCCGGCGTTGGAAGTGGTGCAACTGTGGGAGAATAACTTCACAGGTAGCATTCCAGAGGGTTTAGGCAAGAACGGGAGACTCAACCTTGTTGATCTTTCTTCTAACAAATTAACAGGGACTTTGCCTCCTTACTTGTGTTCTGGGAATACTCTTCAGACTCTTATAACTCTTGGAAATTTCCTTTTTGGTCCAATTCCTGAATCGCTTGGGAGGTGCGAATCTCTTACCCGGATTCGAATGGGAGAGAACTTTTTGAATGGGTCCATTCCTAAAGGGCTTTTTGGACTTCCAAAACTAACGCAGGTTGAGCTTCAGGATAATTATCTCTCTGGAGAGTTTCCTGAGGCTGGTTCTGTTGCTGTTAATCTTGGTCAGATTACTCTCTCTAACAACCAGCTTTCTGGGGCTTTGCCTCCCTCCATTGGTAACTTCTCCAGCGTGCAGAAGCTCCTTCTTGATGGCAACATGTTCACTGGTCAGATCCCTCCTCAGATTGGGAGGTTGCAACAGCTTTCTAAGATTGATTTTAGTGGCAACAAGTTCTCGGGTCCTGTTGCGCCCGAGATCAGTCAGTGTAAGCTGTTAACTTTCCTTGACCTTAGCCGCAATGAGCTAACTGGAGAGATCCCAAATGAGATAACTGGCATGAGGATATTGAATTACCTCAATCTTTCCAAGAATCATTTGGTGGGTAGCATTCCCTCCTCGATATCATCTATGCAAAGCTTGACTTCTGTTGATTTTTCATACAACAACCTGTCTGGTTTGGTGCCTGGTACAGGTCAATTCAGCTACTTCAACTACACGTCTTTCTTGGGAAACCCTGACCTGTGTGGCCCCTATTTGGGTGCTTGCAAGGATGGGGTTGCCAATGGTGCACACCAACCTCATGTTAAAGGACTCTCCTCTTCTTTGAAGCTGCTACTTGTTGTTGGGTTGCTTTTGTGTTCCATTGCTTTTGCTGTGGCAGCAATATTCAAGGCTCGGTCACTGAAGAAGGCCAGTGAGGCTCGTGCATGGAAGTTGACTGCGTTCCAACGTTTGGACTTCACTGTTGACGATGTTTTGCATTGCTTGAAGGAGGATAATATTATAGGGAAAGGAGGCGCTGGCATTGTCTACAAAGGGGCTATGCCTAATGGGGATCAGGTTGCTGTGAAAAGGCTTCCAGCTATGAGTAGAGGCTCTTCCCATGATCATGGGTTCAATGCTGAGATTCAGACATTGGGGCGAATCCGACACAGGCACATTGTTAGATTGTTGGGTTTCTGTTCAAATCATGAGACAAACCTTTTGGTCTATGAATACATGCCCAATGGAAGTTTAGGTGAGGTTCTTCATGGAAAGAAAGGGGGTCATTTGCATTGGGACACCAGGTATAAAATTGCGGTGGAGGCTGCCAAGGGGCTTTGCTATCTGCACCATGATTGTTCGCCACTCATTGTCCATCGTGATGTGAAGTCAAACAACATCCTTCTTGATTCTAATCATGAAGCCCATGTTGCTGATTTTGGGCTTGCTAAGTTCCTGCAAGATTCTGGGACATCTGAATGCATGTCTGCTATTGCTGGTTCATATGGATACATAGCTCCAGAGTATGCCTACACATTGAAAGTTGATGAGAAAAGCGATGTATACAGTTTTGGTGTGGTTCTTTTGGAACTTATAACAGGCAGGAAACCAGTTGGAGAATTTGGTGATGGCGTGGACATTGTGCAATGGGTGAGGAAAATGACGGATTCTAACAAGGAAGGAGTTCTTAAAGTTCTTGATCCTAGGCTACCCTCAGTTCCCCTTCACGAAGTGATGCATGTTTTCTATGTAGCCATGCTGTGTGTTGAAGAACAGGCTGTAGAGAGACCAACAATGCGAGAGGTTGTTCAAATACTGACAGAGCTTCCAAAGCCACCTGGCTCTAAGCAGGGAGACTTAACAATAACAGAATCCTCCTTGTCATCATCAAATGCTTTAGAATCTCCATCCTCGGCCTCTAAAGATCATCAAAATCCTCCTCAATCCCCACCACCCGATCTTCTTAGCATTTAA 3030 0.4964 MRVLFLFLFFHFHFPETISAPISEYRALLSLRSAITDVTPPVLSSWNASTPYCSWLGVTCDNRRHVTALNLTGLDLSGTLSGDVAHLPFLSNLSLSANKFSGPIPPALSALSGLRVLNLSNNVFNETFPSELSRLQSLEVLDLYNNNLTGELPLAVAQMQNLRHLHLGGNFFSGQIPPEYGRWQRLKYLAVSGNELNGKIPPEIGNLTSLRELYIGYYNIYTGGIPPEIGNLSELVRLDAAYCGLSGEIPAALGKLQKLDTLFLQVNALSGSLTPELGNLKSLKSVDLSNNMLSGEIPASFGELKNITLLNLFRNKLHGAIPEFIGELPALEVVQLWENNFTGSIPEGLGKNGRLNLVDLSSNKLTGTLPPYLCSGNTLQTLITLGNFLFGPIPESLGRCESLTRIRMGENFLNGSIPKGLFGLPKLTQVELQDNYLSGEFPEAGSVAVNLGQITLSNNQLSGALPPSIGNFSSVQKLLLDGNMFTGQIPPQIGRLQQLSKIDFSGNKFSGPVAPEISQCKLLTFLDLSRNELTGEIPNEITGMRILNYLNLSKNHLVGSIPSSISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGACKDGVANGAHQPHVKGLSSSLKLLLVVGLLLCSIAFAVAAIFKARSLKKASEARAWKLTAFQRLDFTVDDVLHCLKEDNIIGKGGAGIVYKGAMPNGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNHEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPGSKQGDLTITESSLSSSNALESPSSASKDHQNPPQSPPPDLLSI 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02074 1009 Gene3D Ribonuclease Inhibitor 22 219 IPR032675 -
Pumo8g02074 1009 Gene3D Ribonuclease Inhibitor 373 614 IPR032675 -
Pumo8g02074 1009 Gene3D Phosphorylase Kinase; domain 1 653 764 - -
Pumo8g02074 1009 SUPERFAMILY Protein kinase-like (PK-like) 683 958 IPR011009 -
Pumo8g02074 1009 SUPERFAMILY L domain-like 297 613 - -
Pumo8g02074 1009 ProSiteProfiles Protein kinase domain profile. 687 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02074 1009 SMART serkin_6 687 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02074 1009 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 228 960 - -
Pumo8g02074 1009 SUPERFAMILY RNI-like 69 390 - -
Pumo8g02074 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 332 617 - -
Pumo8g02074 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Pumo8g02074 1009 MobiDBLite consensus disorder prediction 970 996 - -
Pumo8g02074 1009 Gene3D Ribonuclease Inhibitor 220 372 IPR032675 -
Pumo8g02074 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 656 764 - -
Pumo8g02074 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 765 975 - -
Pumo8g02074 1009 Gene3D Transferase(Phosphotransferase) domain 1 765 973 - -
Pumo8g02074 1009 Pfam Leucine Rich Repeat 282 304 IPR001611 GO:0005515
Pumo8g02074 1009 MobiDBLite consensus disorder prediction 961 1009 - -
Pumo8g02074 1009 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Pumo8g02074 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 81 324 - -
Pumo8g02074 1009 SMART LRR_typ_2 280 304 IPR003591 -
Pumo8g02074 1009 SMART LRR_typ_2 328 352 IPR003591 -
Pumo8g02074 1009 SMART LRR_typ_2 135 158 IPR003591 -
Pumo8g02074 1009 SMART LRR_typ_2 111 134 IPR003591 -
Pumo8g02074 1009 SMART LRR_typ_2 568 591 IPR003591 -
Pumo8g02074 1009 SMART LRR_typ_2 159 183 IPR003591 -
Pumo8g02074 1009 Pfam Protein tyrosine and serine/threonine kinase 689 958 IPR001245 GO:0004672|GO:0006468
Pumo8g02074 1009 Pfam Leucine Rich repeats (2 copies) 136 176 IPR025875 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02074 Pumo-Chr8 57630253 57634373 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02074 11 988 Receptor kinase-like Gene Family AT5G65700 81.054 0.0 1601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo8g02074 PK_Tyr_Ser-Thr 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02074 - - gmx:548032 1900.56