Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02072 ATGCAGAACATGCCGCAACCCTTGCTTCTGTTTTTTCTTTTATGTTTATTGTGGTCAAGTGGTTTATCTCAATGGGTGTCCCTCGAGAGAGAGACTCAAATTCTACTTCGGGTCAAGAACACTCAGCTTGAAGACAAAAACAAGAGTCTCAAAAATTGGGTGTCCAACACAGACCACAACCCCTGCAACTGGACCGGCATTAACTGCGACTCACGAAACCACTCACTTGTCTCCATTGACCTCTCCGAAATTGGAATCTACGGCGAGTTCCCCTTCGGTTTTTGTCGCATTCACACCCTCCAAAACCTTTCCCTCGCTTCCAATTTTCTCACCAACTCTATCTCCCCCAACTCTCTGCTTCTCTGTTCCCATCTCCGTCTCTTGAACCTCTCCGACAATTACTTCGTCGGAGTCCTGCCGGAATTTCCGCCGGAGTTCACCGAACTAAGAGAACTAGACCTCTCAAAGAACAACTTCACCGGCGACATTCCGGCGAGTTTTGGACAGTTCCCACATCTGAGAACGCTCGTTTTATCCGGAAACCTTCTCAGCGGAACGATTCCTCCCTTCTTAGGAAACCTCAGTGAGTTAACTCGCTTGGAACTAGCTTATAACCCCTTTAAACCAGGACCATTACCTTCCCAACTAGGAAACCTCTCTAATCTCGAAACACTGTTCCTCGCCGATGTAAACCTCGTAGGGGAAATTCCACACTCCATCGGGAACCTCACCTCGCTCAAGAACTTTGATTTGTCTCAAAACTCCTTGTCAGGTAACATCCCAAACAGCATTTCAGGTCTGAAAAACGTTGAACAAATTGAACTATTTGAAAACCAGCTTTCCGGCGAATTACCCCAAGGTTTAGGAAACCTCAGCAGTTTGATTCGCTTAGACCTCTCTCAGAACGCTCTCACGGGAAAACTACCAGACACAATTGCTTATTTGCATCTTAATTCTCTCAACCTGAACGACAATTTTCTCAGGGGAGAAATTCCTGAGAGTCTAGCTTCAAACCCGAATCTGAAGCAACTGAAACTCTTCAACAACAGCTTCACCGGGAAACTCCCACGAGATCTGGGGCGAAACTCTAGCATAGAAGAATTCGATGTCTCGACTAATGACTTCGTGGGAGAGTTGCCAAAGTACCTCTGCCAGAGTAACAGACTCGAGCTTCTCATCACGTTCGCGAATCGCTTCTCTGGAACGCTCCCTGACCAATACGGCGAGTGTCGTTCACTTCAGTATGTCAGAATCCAGAATAACCAACTCTCGGGCCCGGTGCCGCCAACGTTTTGGGCCCTTACTGGGCTTCAGTTTCTGGAAATGTCCAACAACAGGTTCCAAGGTTCTGTCTCTGGTTCCATCTCTAGGGGACTCACCAAACTCATTTTGTCCGGTAACAGCTTTTCTGGCCAATTCCCGAAGGAAATATGTGAACTTCATAACCTCGTGGAGATTGACGTCGGCAAGAACCGCTTCACCGGTCAAGTTCCCACGTGCGTAACTGGGTTGGCTAAGTTACAGAAACTTAGACTGCAAGAGAACATGTTCACCGGCGTGATTCCCAGTAACGTGAGCCTCTGGACAGACATGACAGAGTTGAACTTGTCGTTTAACCGGTTCACCGGGTCAATCCCACCGGAACTTGGTGGTTTACCGGATTTGACATACCTTGATCTCGCCGTTAATTCATTAACCGGGGAGATTCCGGTGGAGTTGACGAACCTAAGACTCAACCAGTTCAACGTCTCTGATAACAAGTTGCACGGGGTGGTTCCTTTAGGTTTCAACCGGCAAGTGTACTTATCGGGTCTAATGGGAAACCCTGGTCTCTGTAGCGCCGATATCAAAACCCTGCCTTCTTGTTCCAAACGCAGGCCGTTTTCTGTGCTTGCTATTGTCGTTTTAGTTGCCTGTGTTTCGCTCCTTGTGGGGTCCACGTTGTGGTTCCTGAAGAGCAAGATGCGTGGTTTTGGCGGCAAATCCAAGAGCTCCTGTATGTCAATCGCGTTTCAGAGAGTGGGGTTCAATGAAGACGACATAGTTCCGAACTTAACCAGTGACAATTTGATTGGCACAGGGAGTTCGGGTCGGGTTTACAAGGTGAGGCTCAAAACGAGGCAGATAGTGGCGGTGAAGAAACTGTTTGGTGGTGCGCAAAAGCCGGACATGGAATTGGTGTTCAGGGCGGAGATTGAGACATTAGGTAGGATTCGGCATGCTAATATTGTGAAACTGTTGTTTAGTTGCAGTAGTGATGAGTTTAGGATACTGGTGTATGAGTACATGGAGAATGGGAGTTTAGGGGATGTGTTGCATGGTGAGGACAAGTATGGGGAGTTGATGGATTGGTCTAGAAGGTTCGCAATTGCTGTGGGTGCGGCTCAGGGGTTGGCTTATTTGCACCATGATTGTGTGCCGGCTATTGTTCACAGGGACGTCAAGAGTAATAACATTTTGCTGGACCGTGAGTTTGTGCCAAGAGTAGCAGATTTTGGGCTTGCTAAGACATTGCAGCGTGAGGCCACCCAGGGTGCTATGTCCAGGGTTGCTGGATCATATGGTTACATTGCTCCAGAGTATGCTTATACAATGAAAGTGACTGAGAAGAGCGATGTCTATAGTTTTGGGGTGGTGCTGATGGAATTGATCACGGGCAAGAGACCTAATGACTCTTCATTTGGTGAGAACAAGGATATAGTGAAGTGGATCACTGAGACTGTTTTATCACCATCTCCTGAAAGAGGAAGTGGCAATATTGGAGGGGGAAAAGATTATATTATGAGCCAGATTGTGGACCCGAGATTGAACCTAGCCACTTGTGATTATGAAGAGGTTGAGAAGGTTTTAAATGTGGCCCTACTCTGCACCTCAGCGTTTCCCATTAATAGACCCTCAATGAGAAGGGTGGTTGAATTGCTCAAGGACCATAGACTGTCATGA 2943 0.4743 MQNMPQPLLLFFLLCLLWSSGLSQWVSLERETQILLRVKNTQLEDKNKSLKNWVSNTDHNPCNWTGINCDSRNHSLVSIDLSEIGIYGEFPFGFCRIHTLQNLSLASNFLTNSISPNSLLLCSHLRLLNLSDNYFVGVLPEFPPEFTELRELDLSKNNFTGDIPASFGQFPHLRTLVLSGNLLSGTIPPFLGNLSELTRLELAYNPFKPGPLPSQLGNLSNLETLFLADVNLVGEIPHSIGNLTSLKNFDLSQNSLSGNIPNSISGLKNVEQIELFENQLSGELPQGLGNLSSLIRLDLSQNALTGKLPDTIAYLHLNSLNLNDNFLRGEIPESLASNPNLKQLKLFNNSFTGKLPRDLGRNSSIEEFDVSTNDFVGELPKYLCQSNRLELLITFANRFSGTLPDQYGECRSLQYVRIQNNQLSGPVPPTFWALTGLQFLEMSNNRFQGSVSGSISRGLTKLILSGNSFSGQFPKEICELHNLVEIDVGKNRFTGQVPTCVTGLAKLQKLRLQENMFTGVIPSNVSLWTDMTELNLSFNRFTGSIPPELGGLPDLTYLDLAVNSLTGEIPVELTNLRLNQFNVSDNKLHGVVPLGFNRQVYLSGLMGNPGLCSADIKTLPSCSKRRPFSVLAIVVLVACVSLLVGSTLWFLKSKMRGFGGKSKSSCMSIAFQRVGFNEDDIVPNLTSDNLIGTGSSGRVYKVRLKTRQIVAVKKLFGGAQKPDMELVFRAEIETLGRIRHANIVKLLFSCSSDEFRILVYEYMENGSLGDVLHGEDKYGELMDWSRRFAIAVGAAQGLAYLHHDCVPAIVHRDVKSNNILLDREFVPRVADFGLAKTLQREATQGAMSRVAGSYGYIAPEYAYTMKVTEKSDVYSFGVVLMELITGKRPNDSSFGENKDIVKWITETVLSPSPERGSGNIGGGKDYIMSQIVDPRLNLATCDYEEVEKVLNVALLCTSAFPINRPSMRRVVELLKDHRLS 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02072 980 Gene3D Phosphorylase Kinase; domain 1 668 762 - -
Pumo8g02072 980 Gene3D Ribonuclease Inhibitor 210 315 IPR032675 -
Pumo8g02072 980 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 661 762 - -
Pumo8g02072 980 ProSitePatterns Protein kinases ATP-binding region signature. 691 714 IPR017441 GO:0005524
Pumo8g02072 980 SUPERFAMILY Protein kinase-like (PK-like) 682 974 IPR011009 -
Pumo8g02072 980 FunFam Leucine-rich receptor-like protein kinase family protein 212 310 - -
Pumo8g02072 980 Gene3D Transferase(Phosphotransferase) domain 1 763 980 - -
Pumo8g02072 980 SMART serkin_6 685 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02072 980 Pfam Leucine rich repeat 148 206 IPR001611 GO:0005515
Pumo8g02072 980 Pfam Leucine rich repeat 220 280 IPR001611 GO:0005515
Pumo8g02072 980 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 28 194 - -
Pumo8g02072 980 FunFam leucine-rich repeat receptor-like protein kinase TDR 763 980 - -
Pumo8g02072 980 Gene3D Ribonuclease Inhibitor 26 209 IPR032675 -
Pumo8g02072 980 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 197 975 - -
Pumo8g02072 980 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Pumo8g02072 980 SUPERFAMILY RNI-like 68 385 - -
Pumo8g02072 980 FunFam Leucine-rich repeat receptor-like protein kinase TDR 312 624 - -
Pumo8g02072 980 Pfam Protein kinase domain 688 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02072 980 SUPERFAMILY L domain-like 308 624 - -
Pumo8g02072 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Pumo8g02072 980 ProSiteProfiles Protein kinase domain profile. 685 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo8g02072 980 Gene3D Ribonuclease Inhibitor 316 627 IPR032675 -
Pumo8g02072 980 SMART LRR_typ_2 504 528 IPR003591 -
Pumo8g02072 980 SMART LRR_typ_2 434 458 IPR003591 -
Pumo8g02072 980 SMART LRR_typ_2 170 194 IPR003591 -
Pumo8g02072 980 SMART LRR_typ_2 243 267 IPR003591 -
Pumo8g02072 980 SMART LRR_typ_2 146 169 IPR003591 -
Pumo8g02072 980 SMART LRR_typ_2 552 576 IPR003591 -
Pumo8g02072 980 SMART LRR_typ_2 291 315 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02072 Pumo-Chr8 57602947 57607860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02072 26 978 Receptor kinase-like Gene Family AT5G65710 56.674 0.0 1047
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo8g02072 Pkinase 4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02072 - - gmx:100813889 1769.21