Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02040 ATGGATACGACGTTGTTTAGGGTAGTGAGTTTCCAACATCAACAAGATCAATCCCTCAACAACTCCACCACAAGCAGCAGCTCTCGATCCTCCAGACAACAAAACTATCCATACCCACAAGAAGACGAAGAATGCTTCAACTTTTTCATGGATGAAGGAGACCTATCCTCGTCTTCTTCCAAGCACTACTATCCCTATCAGCCCCACCCTCCTTCCACCACCACCGACCTCTCTTTCTCCCCCACCCGTTCTGACCCCTTCCCTTTCCCCTTCGAATTCTCCTCCGGCAAGTGGGCCCACGACATCCTCCTCGAAACCGCACGTGCCGTAGCCGACAAGAACACCACGCGCCTCCAACAACTCATGTGGATGCTAAACGAACTCAGCTCCCCCTACGGCGACACCGACCAGAAACTCGCCTCGTACTTCCTCCAAGCCTTCTTCAGCCGCATCACCCAAGCCGGGGACCGAACCTACCGAACCTTAGCTTCGGCGTCCGAGAAAACATGCTCCTTCGAATCGACCCGGAAGACGGTGCTCAAGTTCCAGGAGGTGAGCCCCTGGACAACCTTCGGCCACGTGGCGTCCAATGGCGCCATCTTGGAAGCCTTGGAAGGCGAGCCCAAACTGCACATAGTTGACATCAGCAACACCTATTGCACCCAATGGCCAACCCTCTTCGAAGCCTTGGCCACTCGAAACGACGACACTCCGCACCTCCGTTTGACCTCCCTCGTCACCGCCGCCACCGCGCAGAAGCTCATGAAGGAAATCGGTGCCAGAATGGAGAAATTCGCCAGGCTCATGGGCGTGCCCTTTAAATTCAACGTCGTGCACCACGCGGGTCAGCTCTCCGAGTTCGATTTCAATGTGTTGGATATCAAAGAAGACGAGGCGTTGGCGATTAACTGCGTTAACACCTTGCATTCGATCAGCGCCGTGGGGAACCATCGCGAGGCGGTGATATCGTCGTTGAGGAGGTTGCAACCGAGGATCGTGACGGTGGTGGAGGAGGAGGCTGACTTGGACGTGGGATTGGAGGGGTTTGAGTTTGTGAAAGGGTTTGAGGAGTGTTTGAGGTGGTTTAGGGTTTACTTTGAGTCATTGGACGAGAGTTTTCCAAGGACGAGCAACGAGAGGTTGATGCTGGAGAGGGAGGCGGGGAGGGCGGTGGTGGACCTGGTGGCGTGTTCGGCGGCGGAGTCGGTGGAGCGGCGGGAGAGGGCGGCGAGGTGGGCGAGGAGGATGCATGGAGCGGGGTTCAATACGGTGGCGTTTAGCGAAGAGGTGTGTGATGATGTGAGGGCGTTGTTGAGGAGGTATAGGGAGGGGTGGGCAATGACACAGTGCTCCGACGCCGGAATATTCCTTTCGTGGAAGGACCAGCCGGTGGTGTGGGCCAGTGCATGGAGGGCCTTGACGTAG 1425 0.5656 MDTTLFRVVSFQHQQDQSLNNSTTSSSSRSSRQQNYPYPQEDEECFNFFMDEGDLSSSSSKHYYPYQPHPPSTTTDLSFSPTRSDPFPFPFEFSSGKWAHDILLETARAVADKNTTRLQQLMWMLNELSSPYGDTDQKLASYFLQAFFSRITQAGDRTYRTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALEGEPKLHIVDISNTYCTQWPTLFEALATRNDDTPHLRLTSLVTAATAQKLMKEIGARMEKFARLMGVPFKFNVVHHAGQLSEFDFNVLDIKEDEALAINCVNTLHSISAVGNHREAVISSLRRLQPRIVTVVEEEADLDVGLEGFEFVKGFEECLRWFRVYFESLDESFPRTSNERLMLEREAGRAVVDLVACSAAESVERRERAARWARRMHGAGFNTVAFSEEVCDDVRALLRRYREGWAMTQCSDAGIFLSWKDQPVVWASAWRALT 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02040 474 ProSiteProfiles GRAS family profile. 90 471 IPR005202 -
Pumo8g02040 474 MobiDBLite consensus disorder prediction 16 38 - -
Pumo8g02040 474 Pfam GRAS domain family 101 471 IPR005202 -
Pumo8g02040 474 MobiDBLite consensus disorder prediction 59 79 - -
Pumo8g02040 474 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 82 464 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02040 Pumo-Chr8 57268843 57270829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02040 4 471 GRAS Transcription Factor Family AT4G37650 61.553 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo8g02040 GRAS 1.1e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02040 - - gmx:100797072 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02040 8 57268843 57270829 Pumo8g02040 8 57268843 57270829 ECH
Pumo8g02040 8 57268843 57270829 Pumo4g01861 4 25160877 25161953 PCT