Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02039 ATGATACAGGGTGGTGATCCTACTGGTACTGGCCGAGGAGGTGAATCTATATGGGGAAAGCCTTTTAAAGATGAAGTTAACTCCAAACTAATTCACTCTGGAAGGGGTGTGGTAAGCATGGCAAACAGTGGCCCACACACTAATGGTTCCCAGTTCTTTATCTTGTACAAGTCTGCAAATCATCTAAACTTCAAACATACAGTCTTTGGAGGAGTTGTCGGTGGCTTGACTACACTAGCAGCGATGGAAAAGGTTCCTGTTGATGATAATGACCGGCCTCTGGAGGAAATCAAGATAACAAGTGTCACGATTTTTGTCAATCCTTACACAGAACCAGATGAGGGAGAAGAGCAGGATAATGCCAAAGAGAAGAATGCAGGGGATGAAGATAATGGTAAGGTAGGCTCATGGTATAGCAATCCTGGCGCTGCAACATCTGAATCTGGAGGTACGGGGGTTGGTGGTGGCGTCGGCAAGTACTTGAAAGCTAGGAATGCTCAAGCTAAATCTGCTACTGTTGACAACAACGGTACAGACGTTGTAGTAAAGAAAAGAAAACTGGGAGTTGCCAGCAGTGAATTTAAAGATTTTTCTGCATGGTAA 603 0.4444 MIQGGDPTGTGRGGESIWGKPFKDEVNSKLIHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGGLTTLAAMEKVPVDDNDRPLEEIKITSVTIFVNPYTEPDEGEEQDNAKEKNAGDEDNGKVGSWYSNPGAATSESGGTGVGGGVGKYLKARNAQAKSATVDNNGTDVVVKKRKLGVASSEFKDFSAW 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02039 200 MobiDBLite consensus disorder prediction 1 21 - -
Pumo8g02039 200 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 103 IPR002130 GO:0000413|GO:0003755
Pumo8g02039 200 SUPERFAMILY Cyclophilin-like 1 111 IPR029000 -
Pumo8g02039 200 MobiDBLite consensus disorder prediction 109 151 - -
Pumo8g02039 200 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 104 IPR002130 GO:0000413|GO:0003755
Pumo8g02039 200 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 1 118 IPR044666 -
Pumo8g02039 200 Gene3D - 1 117 IPR029000 -
Pumo8g02039 200 MobiDBLite consensus disorder prediction 115 130 - -
Pumo8g02039 200 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 36 51 IPR002130 GO:0000413|GO:0003755
Pumo8g02039 200 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 51 63 IPR002130 GO:0000413|GO:0003755
Pumo8g02039 200 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 79 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02039 Pumo-Chr8 57259915 57261168 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02039 1 200 U-box Gene Family AT5G67530 68.780 4.96e-78 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02039 K10598 - gmx:100785814 354.369