Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02029 ATGGGGAGTTCTGGCACTGGCACTGGCACTGGCACCTTTTTTTCCTTGTCTAGCCTCATGTGTGAAGAAGGAGAAGCTAGCTTTTTTGAAGACCAAGATGAGAACCCTGACATTATTGACTCTCTTGATAGTCCATGTTTCGTTTTGGAGGATGAAGAGGAATACATTGAGTATTTGTTCAGACAAGAAACGGGATTTGGATCCCAAAACCATCAATTTTGTGCCTCTGATGATCACTCAAACGGACAATGGTTGAGAAGTGCCCGTGTGAATGCCATTGATTGGATTTTCAATACACAAGCAAAATTTGGGTTCAAAGTTGAGACGGCCTATTTATCAATTACTTACTTTGATCGGTTTCTTTCAAAGCGATCCATCGATGAATCGAAACCTTGGGCCCTTCAGTTATTATCTGTGGCATGTTTATCTATAGCAGCAAAGATGGAAGAGCAAAATGTGCCGGTTCTATCCGAGTATCCAATAGAAGAATATCGCTTTGAGAATAAAGTAATTAAGAACATGGAACTGATGATTTTGAGTACCTTGGAATGGAAAATGGGATCAGCAACTCCTTTTGCCTATTTGCATTACTTTGTCGGCAAGTTCTGCCCTGGATCCAGACCACAAACGATAATCACAAAAGCCATTAAACATATTGTGGCCATGGTCAAAGATGTTAATTTGATGGATCAACGACCATCTATAATTGCCTCGGCTGCCATATTGGCAGCTTTTGATGCCACATTGACAAGAAAGGCCATGGATCTTCGAATAAGTGTAGTCTCATCACGGGCAAATCTAGAAAGTGGACATGTGTTTTTCTGTTACAATCTAATACAGGAAAAGAGGAAGAGCAAAGTTAAGACTCCTTGCTCGAATTTATTGTCTACCCAGTCGAGCTCCACGTGTGTTGTTGAGAACCAATCTGACACTTCTTCGGGAGCTAAGAGAAAACTTAGTTTTGAGGACAGTGAAAATTGTGCTGGACAAAAGCTACATCGGCCTTAG 1008 0.4117 MGSSGTGTGTGTFFSLSSLMCEEGEASFFEDQDENPDIIDSLDSPCFVLEDEEEYIEYLFRQETGFGSQNHQFCASDDHSNGQWLRSARVNAIDWIFNTQAKFGFKVETAYLSITYFDRFLSKRSIDESKPWALQLLSVACLSIAAKMEEQNVPVLSEYPIEEYRFENKVIKNMELMILSTLEWKMGSATPFAYLHYFVGKFCPGSRPQTIITKAIKHIVAMVKDVNLMDQRPSIIASAAILAAFDATLTRKAMDLRISVVSSRANLESGHVFFCYNLIQEKRKSKVKTPCSNLLSTQSSSTCVVENQSDTSSGAKRKLSFEDSENCAGQKLHRP 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02029 335 SUPERFAMILY Cyclin-like 43 186 IPR036915 -
Pumo8g02029 335 ProSitePatterns Cyclins signature. 89 120 IPR006671 -
Pumo8g02029 335 FunFam Cyclin-D5-1 84 187 - -
Pumo8g02029 335 Gene3D - 85 187 - -
Pumo8g02029 335 SMART cyclin_7 94 180 IPR013763 -
Pumo8g02029 335 CDD CYCLIN_AtCycD-like_rpt1 88 184 - -
Pumo8g02029 335 Pfam Cyclin, N-terminal domain 56 186 IPR006671 -
Pumo8g02029 335 MobiDBLite consensus disorder prediction 316 335 - -
Pumo8g02029 335 FunFam Uncharacterized protein 188 252 - -
Pumo8g02029 335 Gene3D - 188 248 - -
Pumo8g02029 335 PANTHER CYCLINS 49 286 IPR039361 -
Pumo8g02029 335 MobiDBLite consensus disorder prediction 311 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02029 Pumo-Chr8 57185291 57187972 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02029 15 239 Core Cell Cycle Gene Families AT4G37630 36.638 4.38e-45 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02029 K18811 - gmx:100798140 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02029 8 57185291 57187972 Pumo8g02029 8 57185291 57187972 ECH