Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02027 ATGAAAGCTCGTCACTTGAGCTTCTACTTCTACATCATCGTTGTCACACTGTCCATATCCCTCTCCATACAAGTCAACACTTCAAAAGGGGTCAACAACACCAGCGCCAATGAATCTGGCACGAGGAGAATTCTGCACCAGCCATTGTTCCCGGCGAGTTCCGCTCCACCGCCAGCAGGCACAGCGTCTCCACCGCCACCACTGCCGGTGGAGACCCCTCCATCCCCGGACGGCGGCAACATCCCCTTCTTCCACGAGTACCCGGCGGGGCCCCCGCCGGATCAGAACCAAGCAGCACCGTCCACGGTGAACTCCACAATCGCAAACCCGACGGCAACACAGCCAACAAAGGGAACAAAGAAAGTAGCAATCGCGATCTCAGTGGGAATTGTGACGCTTGGGATGCTCTCAGCACTGGCTTTCTTTTTATACAAACACAGAGCGAAACACCCCGTGGAGACCCAAAAACTCGTGGGTGGGAATAGCAATAACAATAATCCAAACAGGAACAGCAACAGCAACAGCAACGAGGATGCAAACACAACCTCGGCACCGTCGAGTTTCCTCTACATTGGGACCGTGGAGCCCACGATAACTTCTACCACATTGAACGACTCACGAGATAATAGAGATGCTGTTAAGGTCAATAGATCGCCGTATCACAAGCTCAAGCGATCCGATCGCTACCGGCCGAGTCCGGAATTGCAGCCAATGCCGCCGCTCAGTAAGCCTCCCGACGGAAATTACCCGCCGGCAGTATCGTCCTCGTCGGACTCCGACGAGGAGAGCCGCGGGACGGCGTTTCACTCGCCGCAGAACTCGTCGGTCGACGGCTACTACACGCCGGCGTCGCGGCACAGCTCTCTCGTTAACGGTAGTCCCGCGAAGAGAGAAACAAATTCCACTCCCACACCCGTTGTTGTTCCGTTTTCCAAGCGAACTTCGCCCAAGTCACGCGCTTCGGCACCCTCGCCGGAGATACGACACGTCATCATACCGTCTATAAAGCAGCCTCCACCACCATCGCCGCCGCCGCCGCCGCCGCCACCTCAGCATCCCCGAAAGCCGAAATTCTCGGCGCCTCCCCCACCTCCGAATTTGAAGCGTCTCCAGTCAACAACCGACACTGCTTTGCACGTGTCAAAGACTTCACTTAATCCTCCTCCGCCACCGCCTCCTCCTCCTCCTCCGCCGCGAAAATCAGAGTCTCCGGCGGTTAGTGCTTCCTCTACTTCTGCATCGGTAAAGCGGCAGTCTTGGTCACCAGTTCAATGTAGCGTGACGAAAGGTTCTGAGGAGGTTGAACAAAGTGTGAGCTCTTCCGAGAGGCATGAAGCCAATGACACGGATGGAGCCAAACCAAAATTGAAAGCTCTGCATTGGGATAAAGTGCGTGCGACCTCAGATCGTGCTACTGTGTGGGACCAGATAAAATCAAGCTCCTTTCAGTTAAACGAGGACATGATGGAATCGTTGTTTGGATGTAAAGCCACGAATTCTGCCCCTAAAGAACCTCCCAGAAAACCAGTTCTTCCTTCGGTTGATCAGGAGAACAGGGTGTTAGACCCGAAGAAGTCACAGAACATAGCTATACTGCTCAGGGCTTTGAATGTGACCAGAGATGAGGTGTCTGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTGGGCACTGAGCTATTGGAAACCCTAGTAAAGATGGCTCCTACTAAAGAGGAAGAGATAAAACTTAAAAACTATGATGGTGATCTCTCAAAACTTGGATCTGCAGAAAGATTTCTTAAAGCAGTGCTTGATATCCCTTTCGCCTTTAAAAGAGTTGAAGCCATGCTATATAGAGCCAACTTTGATGCAGAAGTTAACTACCTTAGAACGTCTTTTCAAACCATGGAGGCTGCAAGTGAGGAATTAAAGAACAGCCGGTTATTCCTCAAACTCCTTGAAGCTGTTCTAAGGACAGGAAACAGAATGAATGTTGGCACTAATCGAGGGGATGCAAAAGCTTTCAAACTGGACACACTTCTAAAACTTGTAGATATAAAGGGAACAGACGGAAAGACCACATTGCTACACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGTGCAGGAGCTGAATCTGCAAATGATAATGTGAAGATGGATTCCAAATTTAATGAGGATGAGTTTAAGAAACAAGGATTGCAGGTTGTGGCAGGGCTCAGTAGAGATCTTAGTAATGTAAAAAAAGCAGCAGGAATGGATTCAGATGTCTTGAGCAACTATCTTTCAAAGCTTGAAACAGGGCTTGATAAAGTGCGATTGGTTTTGCAATATGAGAAGCCAGACACGCAAGGCAATTTCTTTAACTCCACAAAGCTATTTCTGAAATATGCTGAAGATGAAATTGTAAGGATTAAAGCAGATGAGAGAAAAGCCTTGTACCTTGTGAAAGAAGTTACAGAATACTTTCATGGGAATGCAGCAAAGGAAGAAGCCCACCCTCTCAGAATTTTCATGATTGTAAGAGACTTTCTGAATATCTTGGATCTAGTGTGCAAAGAAGTGGAAAAAATGCATGATAGAATTGTTGGTGGTTCTGGCAGATCCTTCCGAATAGCTTCAAATGCATCATTACCTGTTCTCAACAGGTACAATCATCCAAAGCAAGATAAAAGCTCTGATGAGGAAAGCTCATCCCCCTAG 2682 0.4873 MKARHLSFYFYIIVVTLSISLSIQVNTSKGVNNTSANESGTRRILHQPLFPASSAPPPAGTASPPPPLPVETPPSPDGGNIPFFHEYPAGPPPDQNQAAPSTVNSTIANPTATQPTKGTKKVAIAISVGIVTLGMLSALAFFLYKHRAKHPVETQKLVGGNSNNNNPNRNSNSNSNEDANTTSAPSSFLYIGTVEPTITSTTLNDSRDNRDAVKVNRSPYHKLKRSDRYRPSPELQPMPPLSKPPDGNYPPAVSSSSDSDEESRGTAFHSPQNSSVDGYYTPASRHSSLVNGSPAKRETNSTPTPVVVPFSKRTSPKSRASAPSPEIRHVIIPSIKQPPPPSPPPPPPPPQHPRKPKFSAPPPPPNLKRLQSTTDTALHVSKTSLNPPPPPPPPPPPPRKSESPAVSASSTSASVKRQSWSPVQCSVTKGSEEVEQSVSSSERHEANDTDGAKPKLKALHWDKVRATSDRATVWDQIKSSSFQLNEDMMESLFGCKATNSAPKEPPRKPVLPSVDQENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGTELLETLVKMAPTKEEEIKLKNYDGDLSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDAEVNYLRTSFQTMEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGAGAESANDNVKMDSKFNEDEFKKQGLQVVAGLSRDLSNVKKAAGMDSDVLSNYLSKLETGLDKVRLVLQYEKPDTQGNFFNSTKLFLKYAEDEIVRIKADERKALYLVKEVTEYFHGNAAKEEAHPLRIFMIVRDFLNILDLVCKEVEKMHDRIVGGSGRSFRIASNASLPVLNRYNHPKQDKSSDEESSSP 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02027 893 MobiDBLite consensus disorder prediction 249 321 - -
Pumo8g02027 893 SUPERFAMILY Formin homology 2 domain (FH2 domain) 388 852 - -
Pumo8g02027 893 PRINTS Proline rich extensin signature 376 401 - -
Pumo8g02027 893 PRINTS Proline rich extensin signature 239 255 - -
Pumo8g02027 893 PRINTS Proline rich extensin signature 352 369 - -
Pumo8g02027 893 PRINTS Proline rich extensin signature 225 237 - -
Pumo8g02027 893 PRINTS Proline rich extensin signature 333 349 - -
Pumo8g02027 893 PRINTS Proline rich extensin signature 305 326 - -
Pumo8g02027 893 MobiDBLite consensus disorder prediction 207 231 - -
Pumo8g02027 893 MobiDBLite consensus disorder prediction 96 119 - -
Pumo8g02027 893 ProSiteProfiles Formin homology-2 (FH2) domain profile. 446 867 IPR015425 -
Pumo8g02027 893 MobiDBLite consensus disorder prediction 51 76 - -
Pumo8g02027 893 MobiDBLite consensus disorder prediction 436 452 - -
Pumo8g02027 893 MobiDBLite consensus disorder prediction 156 206 - -
Pumo8g02027 893 MobiDBLite consensus disorder prediction 233 247 - -
Pumo8g02027 893 Gene3D Formin, FH2 domain 442 853 IPR042201 -
Pumo8g02027 893 MobiDBLite consensus disorder prediction 48 119 - -
Pumo8g02027 893 MobiDBLite consensus disorder prediction 369 383 - -
Pumo8g02027 893 MobiDBLite consensus disorder prediction 403 435 - -
Pumo8g02027 893 MobiDBLite consensus disorder prediction 334 368 - -
Pumo8g02027 893 Pfam Formin Homology 2 Domain 449 841 IPR015425 -
Pumo8g02027 893 MobiDBLite consensus disorder prediction 384 402 - -
Pumo8g02027 893 MobiDBLite consensus disorder prediction 154 452 - -
Pumo8g02027 893 PANTHER FORMIN-RELATED 385 887 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pumo8g02027 893 SMART it6_source 446 856 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02027 Pumo-Chr8 57160550 57165892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02027 403 883 FH2 protein (formin) Gene Family AT5G67470 70.722 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02027 - - gmx:100798670 1404.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02027 8 57160550 57165892 Pumo8g02027 8 57160550 57165892 ECH
Pumo8g02027 8 57160550 57165892 Pumo4g01866 4 25212785 25214626 PCT