Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02021 ATGAGTTGCAACGGGTGCCGTGTCCTTCGAAAGGGTTGCAGCGAGTCTTGTATCCTGCGGCCGTGTCTACAGTGGATCGACACGCCCGAAGCCCAAGGCCATGCCACTGTCTTCGTAGCCAAATTCTTCGGCCGTGCCGACCTCATGTCCTTCATTTCCAACGTCCCTGAACCCAAAAGGCCCGCTCTGTTTCAATCTCTGCTGTTCGAAGCGTGTGGACGAACGGTGAACCCTGTCAACGGTGCTGTTGGCCTTTTATGGACCGGGAACTGGCACGTGTGCCAGGCGGCGGTTGAGACGGTACTCCGCGGCGGCACCGTCAGGCCCATGCCGGAGCTTCTAGGCCTTGACGCTCCCACTCCCACCGCCGATTACGCCTCCGAAGGAGAAGTTACCTGTACCGACAAGTGGAGGGTCCGAGATCCGAACCCGAATTTCCGGTTCCCGGATTCGAGGTCCGATAAGGCTGCCTCCGGCGGCAAACGCAAGCGACTTGAAGAGCTCGCCAGGCTCCAGACGGCGACCACCGATCTCAATCTCCGGCTGACGCCGAGTTTTCTGCAGAACGCGGCGAGCTTCGGCTGCCGGCAGGAAATTCGCTGGCCGGGGTCGCCGTCGATGAACTCCGAGGAGTCCGGGACGACGACGGCGTGCTTGGAAAGCGGGATCGGAGATCACTACGCTCCCGACGGAGACCGGAAAGTGCTGAACCTCTTCATTTGA 723 0.6058 MSCNGCRVLRKGCSESCILRPCLQWIDTPEAQGHATVFVAKFFGRADLMSFISNVPEPKRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTVRPMPELLGLDAPTPTADYASEGEVTCTDKWRVRDPNPNFRFPDSRSDKAASGGKRKRLEELARLQTATTDLNLRLTPSFLQNAASFGCRQEIRWPGSPSMNSEESGTTTACLESGIGDHYAPDGDRKVLNLFI 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02021 240 MobiDBLite consensus disorder prediction 143 162 - -
Pumo8g02021 240 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 221 - -
Pumo8g02021 240 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Pumo8g02021 240 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02021 Pumo-Chr8 57028459 57029869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02021 1 239 AS2 family AT3G49940 55.212 6.33e-82 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pumo8g02021 LOB 1e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02021 8 57028459 57029869 Pumo4g01872 4 25334034 25335388 ECH
Pumo8g02021 8 57028459 57029869 Pumo8g02021 8 57028459 57029869 ECH
Pumo4g01872 4 25334034 25335388 Pumo8g02021 8 57028459 57029869 PCT