Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02007 ATGAGAAAAGAACGACTGAGGACTCTTAAGGAGACGCTAATTGTGATTCAGCAGAAACTGGACGTGAGTCGCGGCACAGTCGTCGGAATCAATCATCGGAGGCCAAATTTTTTCATATCAATTATACCAAACAGCACCATTTCAACGCTATACGTCGTCGCATCTCTGTGTCGGAGCTGCAGAGAACATGGCTTCAGTAGCGCTTCCGAATCAGCTTGGACAAATTTTCAGGTAGAGAACGCGTACGAGCTGTTAGGAGTGTCCGAGACCAGCTCTTTTGACGAGATTAAAGCGTCGTTTCGCAAATTGGCCAAAGAGACTCACCCGGACCTCGCTGAGTCAAGGAACGATTCCAGTGAGTCTCGACGATTTGTGCAAATCCTGGCTGCTTACGAGATTCTTTCAGATTCTCAAAAGAGAGCCCATTATGACATGTACCTGTTGTCTCAGAAAAAGCTTATGCAAAAGCATTCTGGACAGGGTTCAAAATTGCTTATTTACAAATCACAGGCTAGTACATTCAAGGAGATGGAAGTTGTTGAATGGTTAAAATGGTACAGATTAACTATAAATAATATTTTGTCAGAAAAGAAGGTGGTAGTTGGAACAGGCTATTTTGATGTACTTGAGAGAGATTTTTATTCAGCTATTCATGCAGCATACTATGGTCCTGAAATTGATTCCATGGAGCTTCTTCCTGATTGCTTTGAGGCTGAGGAGAGGTCCTCTTATGAAACTCCTGAGGTTTTGCACTTAGTTTCAGGACGTGATCTCTTCGGGATGGTTTGCCTAGCCAACAAGGTTCCAGAGATATCAATTACTAACAATGAGAAGTTAACTTCTTTTAGATCCTTCCATTCAGGCCTGTGTCAATCTATAACAGATTTGAAAGTCCACAGGAATGCAGAAAGATCAGATGATTTTGAAACTCATCAAGGTCACAGCTCTAAAACTTCAAGTATTGTATCAGATGCATATAGACATCTAGAATTGCACATCTCTGGAAGAGTGGTTGCTACAGCATCTAGGGCCCTACCTAGATGCTGTTCTGATGAGATGCAGACAGAAGATACTGAAGATCACATTCATGTGTTCCTTAATTTATACGAAGATCCCAAACATATTAGCTGTGATTTTTGGAAAGATTACCTTGCAAATGGTGCAGTTGGAAGAAGAATTCATTTGGGAACCATATCTGGACTTGGGAGCAGTCCAGATGAAGGTTGCTGTTATGTCTACAATGACAAGGGTACAAAGACCCATGTGATTATGAAGCATAGAACATTGATGGTGAAGCATATGCACTGGTATGAAGTGGGTGAGAAAGTTTCAGTTTGTGAGTGTAGGTGCACTAGAGCACGTTTACCCCCAAGCAAATTTTGGCTATTTGAGCCTCGTTGTGGCTTCCATGACATAGGGGGTTGGTATGTTGAAACATATGGCAAAGATAAGAATGGTCGGACAATGCCATCACAGAGGTTCTGGGATGGCTTGGACTATAGCGAGCAAGCTGACAGAAGACTTCATCCAGCTATGTATCTATTTGCTCTTGCATATCGGACACTTGATCTTGAATATGCCAAAGCAAGCAAGAAATCATTTAGGAATGTTGTTGGAGGACAAATGTTCCGAGTTCTTCATTGGTGCAAGAAACTTGTTCAATAG 1665 0.4192 MRKERLRTLKETLIVIQQKLDVSRGTVVGINHRRPNFFISIIPNSTISTLYVVASLCRSCREHGFSSASESAWTNFQVENAYELLGVSETSSFDEIKASFRKLAKETHPDLAESRNDSSESRRFVQILAAYEILSDSQKRAHYDMYLLSQKKLMQKHSGQGSKLLIYKSQASTFKEMEVVEWLKWYRLTINNILSEKKVVVGTGYFDVLERDFYSAIHAAYYGPEIDSMELLPDCFEAEERSSYETPEVLHLVSGRDLFGMVCLANKVPEISITNNEKLTSFRSFHSGLCQSITDLKVHRNAERSDDFETHQGHSSKTSSIVSDAYRHLELHISGRVVATASRALPRCCSDEMQTEDTEDHIHVFLNLYEDPKHISCDFWKDYLANGAVGRRIHLGTISGLGSSPDEGCCYVYNDKGTKTHVIMKHRTLMVKHMHWYEVGEKVSVCECRCTRARLPPSKFWLFEPRCGFHDIGGWYVETYGKDKNGRTMPSQRFWDGLDYSEQADRRLHPAMYLFALAYRTLDLEYAKASKKSFRNVVGGQMFRVLHWCKKLVQ 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02007 554 PRINTS DnaJ domain signature 82 100 IPR001623 -
Pumo8g02007 554 PRINTS DnaJ domain signature 119 139 IPR001623 -
Pumo8g02007 554 PRINTS DnaJ domain signature 100 115 IPR001623 -
Pumo8g02007 554 CDD DnaJ 80 136 IPR001623 -
Pumo8g02007 554 SUPERFAMILY Chaperone J-domain 77 150 IPR036869 -
Pumo8g02007 554 ProSiteProfiles dnaJ domain profile. 80 147 IPR001623 -
Pumo8g02007 554 SMART dnaj_3 79 139 IPR001623 -
Pumo8g02007 554 Gene3D DnaJ domain 68 166 IPR036869 -
Pumo8g02007 554 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 50 553 - -
Pumo8g02007 554 Pfam DnaJ domain 80 144 IPR001623 -
Pumo8g02007 554 ProSitePatterns Nt-dnaJ domain signature. 124 143 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02007 Pumo-Chr8 56891974 56904221 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02007 82 146 C2H2 Transcription Factor Family AT1G74250 42.647 4.09e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02007 - - gmx:100805332 1045.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02007 8 56891974 56904221 Pumo8g02007 8 56891974 56904221 ECH