Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01997 ATGCCTCCTCAAGAGAGCCAACAACCTCTGTTGTCGGAAGAGCAAGAAGAGACAGCCTACGATTCCTCGGAGAAGGTCGTGGTGGTCGGAATCGACGAGCACGACGGCGACGTGGAGGCGCCGCCGTTCTCATGGCGGAAGCTGTGGCTGTTCACTGGGCCCGGGTTTCTCATGAGCATCGCGTTTCTGGATCCCGGGAACCTCGAGGGGGATCTTCAGTCCGGTGCCGTTGCTGGGTACTCGCTCTTGTGGCTCCTCATGTGGGCCACGGCTATGGGCCTTATTATCCAGCTTCTCTCGGCTCGGCTCGGCGTGGCCACTGGGAGACACTTAGCCGAACTCTGCAGAGAAGAGTATCCCACATGGGCTAGGATTGTGCTGTGGTTGATGACTGAGGTGGCTCTTATTGGCGCTGACATACAAGAGGTTATTGGGAGCGCTATTGCTATCAGGATTCTCAGTAACGGCGTCGTTCCCCTCTGGGCTGGGGTCATCATTACAGCTTTAGATTGTTTTATTTTTCTCTTTCTTGAGAACTATGGTGTGCGGAAACTGGAAGCGTTTTTCGCTGTTCTGATTGGTGTAATGGCTCTCTCATTTGCGTGGATGTTTGGTGAAGCCAAGCCCAATGGTGTTGATGTTCTTGTTGGTGTTTTGGTTCCTAAACTTAGCTCCAGAACTATACAGCAAGCTGTTGGAGTTGTGGGTTGCATTATTATGCCTCACAATGTGTTCTTGCATTCTGCGCTTGTTCAATCAAGGCAGGTTGACCCCCGCAAGAAAGGCCGTGTTCAGGAAGCTCTTAATTACTACTCGATAGAGTCCACCATCGCCCTTATAGTGTCCTTTGCGATTAATATATGTGTCACGACTGTGTTTGCTAAGGGCTTTTATGGTACTGAAATAGCAAATAGCATTGGTCTTGTAAATGCAGGGCAGTACCTTCAGGAGAAGTATGGGGGTGGACTATTTCCTATCCTGTATATATGGGGTATTGGGTTATTAGCAGCTGGCCAGAGTAGCACAATTACTGGTACATATGCTGGACAATTTATCATGGGGGGTTTTCTGAATTTAAGGTTGAAAAAGTGGATAAGAGCATTGATTACACGAAGTTTTGCAATCATCCCAACCATCATAGTTGCTCTTATATTCGATACCTCAGAGGAATCATTAGATGTTCTGAATGAATGGCTTAATGTTCTGCAGTCAGTTCAAATCCCCTTTGCACTCATTCCCTTGCTTTGCTTGGTGTCCAAAGAACAGATAATGGGCAGTTTCAAAATTGGCCCTGTCCTCAAGATTATTTCCTGGGTTGTAGCTGCTCTGGTGATAGTGATAAACGGTTATCTATTGCTGGAATTCTTCTCCTCTGAAGTGAATGGAGCAGTGTTTGCCACTGTAGTGTGTGTATTAACAGCTGCATATGTTGCATTTGTACTTTACCTTATTTCACGGGCAATTACCTATACACCGTGGCAAAGTTTAACCCGATCAAGATCAAAGACAGTTGCTAGCACAGAGAATTGA 1530 0.4699 MPPQESQQPLLSEEQEETAYDSSEKVVVVGIDEHDGDVEAPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAVAGYSLLWLLMWATAMGLIIQLLSARLGVATGRHLAELCREEYPTWARIVLWLMTEVALIGADIQEVIGSAIAIRILSNGVVPLWAGVIITALDCFIFLFLENYGVRKLEAFFAVLIGVMALSFAWMFGEAKPNGVDVLVGVLVPKLSSRTIQQAVGVVGCIIMPHNVFLHSALVQSRQVDPRKKGRVQEALNYYSIESTIALIVSFAINICVTTVFAKGFYGTEIANSIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWIRALITRSFAIIPTIIVALIFDTSEESLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGSFKIGPVLKIISWVVAALVIVINGYLLLEFFSSEVNGAVFATVVCVLTAAYVAFVLYLISRAITYTPWQSLTRSRSKTVASTEN 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01997 509 Hamap Divalent metal cation transporter MntH [mntH]. 34 456 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo8g01997 509 NCBIfam Nramp family divalent metal transporter 53 422 - -
Pumo8g01997 509 MobiDBLite consensus disorder prediction 1 22 - -
Pumo8g01997 509 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 31 486 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo8g01997 509 Pfam Natural resistance-associated macrophage protein 69 430 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo8g01997 509 PRINTS Natural resistance-associated macrophage protein signature 231 254 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo8g01997 509 PRINTS Natural resistance-associated macrophage protein signature 400 419 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo8g01997 509 PRINTS Natural resistance-associated macrophage protein signature 366 383 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo8g01997 509 PRINTS Natural resistance-associated macrophage protein signature 182 203 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo8g01997 509 PRINTS Natural resistance-associated macrophage protein signature 338 357 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo8g01997 509 PRINTS Natural resistance-associated macrophage protein signature 157 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo8g01997 509 PRINTS Natural resistance-associated macrophage protein signature 127 153 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo8g01997 509 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 46 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01997 Pumo-Chr8 56729617 56733055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01997 1 493 Inorganic Solute Cotransporters AT2G23150 79.681 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01997 K21398 - gmx:100789871 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01997 8 56729617 56733055 Pumo8g01997 8 56729617 56733055 ECH